Part of scaffold_1547 (Scaffold)

For more information consult the page for scaffold_1547 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SPIN1 ENSTTRG00000005602 (Bottlenosed dolphin)

Gene Details

spindlin 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005286, Bottlenosed dolphin)

Protein Percentage 95.33%
cDNA percentage 96.76%
Ka/Ks Ratio 0.70087 (Ka = 0.0292, Ks = 0.0417)

SPIN1 ENSBTAG00000003044 (Cow)

Gene Details

spindlin-1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000003961, Cow)

Protein Percentage 94.94%
cDNA percentage 94.55%
Ka/Ks Ratio 0.2595 (Ka = 0.0322, Ks = 0.124)

SPIN1  (Minke Whale)

Gene Details

spindlin 1

External Links

Gene match (Identifier: BACU019041, Minke Whale)

Protein Percentage 89.37%
cDNA percentage 93.31%
Ka/Ks Ratio 0.59852 (Ka = 0.0603, Ks = 0.1007)

Genome Location

Sequence Coding sequence

Length: 774 bp    Location:104083..142633   Strand:+
>bmy_17525
ATGAAGACCCCATTCGGGAAGACACCTGGCCAGCGGCCCAGAGCTGATGCAGATGATACCTTACGTGTGTATATGTGTGAATACAGAAAACATCGGAGCAGTGTGGGGCCGAGCAAACCTGTTTCCCAGCCCCGGCGGAACATCGTAGGCTGCAGGATTCAGCATGGGTGGAAAGAGGGGAATGGCCCCATCACCCAGTGGAAAGGAACCGTTCTGGACCAGGTGCCTGTAAATCCTTCTTTGTATCTTATAAAATACGATGGATTTGACTGTGTTTATGGACTAGAACTTAATAAAGATGAAAGAGTTTCTGCGCTTGAAGTCCTCCCTGATAGAGTTGCAACATCTCGAATCAGTGATGCACACCTAGCCGACACAATGATTGGCAAAGCAGTGGAGCACATGTTTGAGACCGAGGATGGCTCTAAAGACGAGTGGAGGGGAATGGTCTTAGCACGCGCCCCTATAATGAACACATGGTTTTACATCACCTATGAAAAAGATCCTGTCTTGTACATGTACCAGCTCTTAGATGATTATAAAGAAGGCGACCTTCGCATTATGCCCGATTCTAATGATTCACCTCCAGCAGAAAGGGAACCAGGAGAAGTTGTGGACAGCCTGGTAGGCAAACAAGTGGAATATGCCAAAGAAGATGGCTCTAAAAGGASTGGCATGGTCATTCATCAAGTAGAAGCCAAACCGTCTGTCTATTTCATCAAGTTTGATGATGATTTCCATATTTATGTCTACGATTTGGTGAAAACATCCTAG

Related Sequences

bmy_17525T0 Protein

Length: 258 aa      View alignments
>bmy_17525T0
MKTPFGKTPGQRPRADADDTLRVYMCEYRKHRSSVGPSKPVSQPRRNIVGCRIQHGWKEGNGPITQWKGTVLDQVPVNPSLYLIKYDGFDCVYGLELNKDERVSALEVLPDRVATSRISDAHLADTMIGKAVEHMFETEDGSKDEWRGMVLARAPIMNTWFYITYEKDPVLYMYQLLDDYKEGDLRIMPDSNDSPPAEREPGEVVDSLVGKQVEYAKEDGSKRXGMVIHQVEAKPSVYFIKFDDDFHIYVYDLVKTS*