Part of scaffold_1565 (Scaffold)

For more information consult the page for scaffold_1565 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CTNND1 ENSTTRG00000002103 (Bottlenosed dolphin)

Gene Details

catenin (cadherin-associated protein), delta 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001976, Bottlenosed dolphin)

Protein Percentage 82.66%
cDNA percentage 82.41%
Ka/Ks Ratio 0.15378 (Ka = 0.0065, Ks = 0.0424)

CTNND1 ENSBTAG00000002411 (Cow)

Gene Details

catenin delta-1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000041323, Cow)

Protein Percentage 95.97%
cDNA percentage 89.66%
Ka/Ks Ratio 0.04445 (Ka = 0.0201, Ks = 0.4519)

CTNND1  (Minke Whale)

Gene Details

catenin (cadherin-associated protein), delta 1

External Links

Gene match (Identifier: BACU017250, Minke Whale)

Protein Percentage 98.06%
cDNA percentage 98.02%
Ka/Ks Ratio 0.22231 (Ka = 0.0106, Ks = 0.0478)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2796 bp    Location:410355..433760   Strand:+
>bmy_17552
ATGGACGACTCAGAGGTGGAGTCGACCGCCAGCATCTTGGCCTCTGTGAAGGAACAAGAGGCCCAGTTTGAGAAGCTGACCCGGGCGCTGGAGGAGGAACGGCGCCACGTCTCGGCGCAACTGGAACGCGTCCGGGTCTCACCACAAGATGCCAACCCGCTCATGGCCAACGGCACCCTCACCCGCCGGCATCAGAACGGCAGGTTTGCGGGCGATGTTGACCTTGAGCGACAGAAATTTTCAGATCTAAAACTCAACGGACCCCAGGATCACAGTCACCTTTTGTATAGCACCATCCCCAGGATGCAGGAGCCAGGGCAGATTGTGGAGACTTACACAGAGGAGGACCCTGAGGGAGCCATGTCTGTTGTCTCTGTGGAGACCTCGGATGATGGAACCACTCGGCGCACAGAGACCACAGTCAAGAAAGTGGTGAAGACCGTGACAACACGGACAGTCCAGCCAGTCTCTATGGGACCAGACGGGCTGCCTGCAGATGCCTCATCAGTTTCGAACAGCTATATCCAGACTCTGGGTCGTGACTTCCGCAAGAATGGCAATGGGGGACCTGGCCCCTATGTGGGGCAAGCAGGCACTGCTACCCTTCCCAGGAACTTCCACTACCCTCCTGATGGATATAGCCGCCACTATGAAGATGGTTATCCAAGTAGCAGTGACAACTATGGCAGTCTGTCCCGGGTGACCCGCATTGAGGAGCGGTATAGGCCCAGCATGGAAGGTTACCGGGCACCCAGTAGACAGGATGTCTATGGGCCCCAGCCCCAGGTTCGGGTAGGTGGGAGCAGCGTGGATCTGCATCGTTTCCATCCAGAGCCTTATGGGCTCGAGGATGACCAGCGTAGCATGGGCTACGATGACGTGGATTACGGCATGATGTCTGATTATGGCACTGGCCGTCGGACTGGGACACCCTCTGACCCTCGGCGACGCCTCAGGAGCTATGAAGACATGATTGGTGAGGAGGTGCCATCAGACCAGTACTATTGGGCTCCTTTGGCCCAACACGAACGGGGAAGTTTAGCAAGCTTGGATAGCCTGCGCAAGGGAGGGCCTCCACCCCCGAATTGGAGACAGCCAGAGCTGCCAGAGGTGATAGCCATGCTAGGATTCCGTTTGGATGCTGTCAAGTCCAATGCAGCTGCATACCTGCAACACTTGTGCTACCGCAATGACAAGGTGAAGACTGACGTTCGGAAGCTCAAGGGTATCCCAGTACTGGTGGGATTGTTAGACCACCCCAAAAAAGAAGTGCACCTTGGAGCCTGTGGAGCTCTCAAGAATATCTCTTTTGGGCGTGACCAGGATAACAAGATTGCTATAAAAAACTGTGATGGTGTTCCTGCTCTTGTGCGATTACTCCGAAAGGCTCGTGATATGGACCTCACTGAAGTGATTACTGGAACCCTGTGGAATCTCTCATCCCATGACTCAATCAAAATGGAGATTGTGGACCATGCACTGCATGCCTTGACAGATGAAGTGATCATTCCGCATTCTGGTTGGGAGCGGGAACCTAATGAAGATTGTAAGCCGCGCCATATTGAGTGGGAGTCTGTGCTCACCAACACAGCTGGCTGCCTTAGGAATGTCAGCTCAGAGAGGAGTGAAGCTCGCCGGAAACTTCGGGAATGTGATGGTTTGGTGGATGCTCTCATTTTCATTGTTCAGGCTGAGATTGGACAGAAAGATTCAGACAGCAAGCTTGTGGAGAACTGTGTTTGCCTCCTTCGGAACTTGTCGTATCAAGTTCACCGAGAAATCCCACAAGCAGAACGTTACCAAGAGGCACCTCCCAATGTTGCCAACARTACTGGGCCACATGCTGCCAGTTGCTTTGGGGCCAAGAAGGGCAAAGGTAAAAAACCCACAGAGGATTCAACAAATGATACAGTGGATTTCCCTAAAAGAACTAGTCCTGCTCGAGGCTATGAACTTTTATTTCAGCCAGAGGTGGTTCGGATATACATCTCACTCCTCAAGGAGAGCAAGAATCCTGCCATCCTAGAAGCCTCAGCCGGGGCCATCCAGAACTTGTGTGCTGGGCGCTGGACGTATGGTCGATAYATCCGCTCAGCTCTGCGTAAACATGCTATTCCTAACTTGGTAAAGAATCTGCCAGGAGGGCAACAGAGCTCTTCCCAGAATTTCTCTGAGGACACTGTGGTCTCTGTTTTGAATACCATCAATGAAGTTATTGCTGAGAACTTGGAGGCTGCCAAAAAGCTTCGAGAGACACAGGGTATTGAGAAGCTGGTTTTGATCAACAAATCAGGGAACCGCTCAGAAAAAGAAGTTCGAGCAGCAGCGCTTGTCTTACAGACAATCTGGGGATATAAGGAACTGCGGAAGCCACTGGAAAAAGAAGGATGGAAGAAGTCAGACTTTCAGGTGAATCTAAACAATGCTTCTCGAAGCCAGAGCAGTCATTCATATGATGATAGCACTCTCCCTCTCATTGACCGGAACCAGAAATCAGATAAGAAACCTGATCGGGAAGAAATTCAGATGAGCAGTATGGGATCAAACACAAAATCATTAGATAACAACTATTCCACACTGAATGAGAGAGGAGACCACAATAGAACACTGGATCGATCTGGGGATCTAGGCGAAATGGAGCCATTGAAGGGAACGCCCCTGATGCAGGACGAGGGGCAGGAATCTCTGGAGSAAGAGGTGGATGTGTTGGTTTTGGATGATGAGGGGGACCAAATGTCTTACCGCCCCCATGCAGAAGATTTAGCACCACTCTCTCCGCTACATCTGGGCTTATAA

Related Sequences

bmy_17552T0 Protein

Length: 932 aa      View alignments
>bmy_17552T0
MDDSEVESTASILASVKEQEAQFEKLTRALEEERRHVSAQLERVRVSPQDANPLMANGTLTRRHQNGRFAGDVDLERQKFSDLKLNGPQDHSHLLYSTIPRMQEPGQIVETYTEEDPEGAMSVVSVETSDDGTTRRTETTVKKVVKTVTTRTVQPVSMGPDGLPADASSVSNSYIQTLGRDFRKNGNGGPGPYVGQAGTATLPRNFHYPPDGYSRHYEDGYPSSSDNYGSLSRVTRIEERYRPSMEGYRAPSRQDVYGPQPQVRVGGSSVDLHRFHPEPYGLEDDQRSMGYDDVDYGMMSDYGTGRRTGTPSDPRRRLRSYEDMIGEEVPSDQYYWAPLAQHERGSLASLDSLRKGGPPPPNWRQPELPEVIAMLGFRLDAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLLDHPKKEVHLGACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSHDSIKMEIVDHALHALTDEVIIPHSGWEREPNEDCKPRHIEWESVLTNTAGCLRNVSSERSEARRKLRECDGLVDALIFIVQAEIGQKDSDSKLVENCVCLLRNLSYQVHREIPQAERYQEAPPNVANXTGPHAASCFGAKKGKGKKPTEDSTNDTVDFPKRTSPARGYELLFQPEVVRIYISLLKESKNPAILEASAGAIQNLCAGRWTYGRYIRSALRKHAIPNLVKNLPGGQQSSSQNFSEDTVVSVLNTINEVIAENLEAAKKLRETQGIEKLVLINKSGNRSEKEVRAAALVLQTIWGYKELRKPLEKEGWKKSDFQVNLNNASRSQSSHSYDDSTLPLIDRNQKSDKKPDREEIQMSSMGSNTKSLDNNYSTLNERGDHNRTLDRSGDLGEMEPLKGTPLMQDEGQESLEZEVDVLVLDDEGDQMSYRPHAEDLAPLSPLHLGL*