Part of scaffold_1579 (Scaffold)

For more information consult the page for scaffold_1579 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

DDX42 ENSTTRG00000006962 (Bottlenosed dolphin)

Gene Details

DEAD (Asp-Glu-Ala-Asp) box helicase 42

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006587, Bottlenosed dolphin)

Protein Percentage 95.82%
cDNA percentage 96.12%
Ka/Ks Ratio 0.32625 (Ka = 0.0266, Ks = 0.0816)

DDX42 ENSBTAG00000021058 (Cow)

Gene Details

DEAD (Asp-Glu-Ala-Asp) box helicase 42

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000028046, Cow)

Protein Percentage 94.84%
cDNA percentage 93.12%
Ka/Ks Ratio 0.14892 (Ka = 0.0309, Ks = 0.2073)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2433 bp    Location:101511..79365   Strand:-
>bmy_17560
ATGAAGAGGCTTGAAGAAAAGGACAAGGAAAGAAAAAACGTAAAGGGTATTCGAGATGACATTGAAGAGGAAGATGACCAATTGTGGGATGGTGAGAAGGGAACCAGAGTGAGCCTTTCCCAGGAAGCTTATTTTCGGTACATGGCAGAGAATCCAACTGCTGGTGTGGTTCAAGAGGAGGAGGAGGATAATTTGGAATACGATAGTGATGGAAATCCAATTGCACCTTCCAAAAAAATCATTGATCCTCTTCCTCCCATTGATCATTCAGAGATTGACTATCCACCATTTGAAAAAAATTTTTACAATGAACATGAAGAGATAACCAACCTCACCCCACAGCAGCTAATAGATCTCCGGCATAAGCTCAATCTTCGGGTTTCTGGTGCTGCACCTCCTAGACCAGGAAGTAGTTTTGCTCATTTTGGGTTTGATGAACAACTTATGCACCAGATTCGGAAATCTGAGTACACACAGCCCACTCCAATACAGTGCCAGGGTGTACCTGTGGCATTAAGTGGTAGAGACATGATTGGTATTGCCAAAACAGGCAGTGGGAAAACTGCGGCCTTTATCTGGCCCATGTTGATTCATATAATGGACCAGAAAGAATTGGAACCAGGTGATGGACCAATTGCAGTGATTGTGTGTCCTACTAGGGAGCTTTGTCAGCAGATCCACGCAGAATGCAAGCGGTTTGGGAAAGCATATAATCTCCGATCAGTGGCCGTGTATGGAGGAGGGAGCATGTGGGAGCAGGCTAAGGCCCTTCAGGAAGGGGCAGAGATTGTTGTCTGTACACCAGTAAAAAATGGATCCATGCATACTGAGAGCATCAAGAATCAGAAAGGTGTTCAGAAGTACCAGGTGCGATCCATAGCAAGTCATGTCCGTCCTGACAGACAGACTCTCTTATTCAGTGCAACTTTTCGGAAAAAGATTGAAAAACTGGCCAGAGACATCCTGATTGACCCTATTCGTGTGGTGCAGGGGGATATTGGAGAGGCAAATGAAGATGTGACTCAGATTGTGGAGATTCTGCATTCTGGGCCCAGTAAATGGAACTGGCTCACCCGGCGTCTAGTGGAGTTTACCTCTTCAGGAAGTGTCCTCCTGTTTGTTACTAAAAAAGCCAATGCTGAAGAGCTAGCCAATAACCTTAAACAGGAGGGTCATGATCTTGGCCTGCTCCATGGTGACATGGATCAGAGTGAAAGAAATAAGGTTATTTCAGACTTTAAGAAAAAGGACATCCCAGTCCTAGTGGCCACAGATGTTGCAGCCCGTGGTCTGGACATTCCTTCAATTAAGACTGTCATTAACTATGATGTGGCACGAGATATTGATACCCATACTCATAGGATTGGCCGAACAGGACGAGCGGGTGAGAAAGGCGTGGCCTATACCTTGCTGACACCCAAGGATAGCAATTTTGCCGGTGACCTTGTCCGGAACTTGGAAGGAGCCAATCAGCATGTTACCAAGGAACTCCTAGATCTGGCCATGCAGAATGCCTGGTTTCGGAAATCCCGCTTCAAAGGAGGGAAAGGGAAAAAGCTGAACATTGGTGGAGGAGGCCTAGGCTACAGGGAGCGGCCTGGCCTCGGCTCTGAGAACACGGACCGAGGAAGTAACAACAATGTAATGAGCAATTACGAGGCCTATAAGCCCTCCACGGGAGCCATGGGAGATCGGCTGACGGCCATGAAAGCAGCTTTCCAGTCACAGTACAAGAGTCACTTTGTTGCTGCCAGTTTAACCAACCAGAAGGCTGGAAGCTCTGCTGCTGGGGCGAGTGGATGGACTAGTGCAGGGAGCTTGAATTCAGTTCCCAGCAGTTCAGCCCAACAGGGCCGTAACAGTCCTGACAGCCCCACTTCCAGTGCCACAAAGGGCATCCCAGGCTTTGGCAGTGCTGGGAACCTCAGCAGTGCCCCAGTGACCTACCCTCCTGCCGGAGCCCAGGGAGTCAACAACACAGCTTCAGGGAATAACAGCCGAGAAGGGATTGGGGGTGGCAATGGGAAAAGAGAGAGATATACTGAGAACCGGGGTGGAAGCCGTCACAGTCACGGAGAGAGTGGGAATCGGCATGGCGATAGCCCACGTCATGGAGATGGTGCTCGCCATGGAGAGGGATACCGCTACCCAGAAAGCAGCAGCCGTCATGCTGATGGCCGCCGTCATGCTGATGGCCATCCTCATGGAGAGAACAGGCATGGAGGAGGTGGAGGCAGACATGGGGAGAGCCGAGGTGCAAACGATGGTCGGAATGGTGAAAGCAGGAAAGAAAGTTGTACTCGTGAAAGCAAGATGGACCCCAAGGTGGACAGCACCAAGACGGACAAGACGGACAGCAAGACAGACAAGACTACTGATGGCTTCGCTGTCCCCGAGCCGCCCAAGCGCAAGAAGAGCCGATGGGACAGCTAG

Related Sequences

bmy_17560T0 Protein

Length: 811 aa      View alignments
>bmy_17560T0
MKRLEEKDKERKNVKGIRDDIEEEDDQLWDGEKGTRVSLSQEAYFRYMAENPTAGVVQEEEEDNLEYDSDGNPIAPSKKIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPVKNGSMHTESIKNQKGVQKYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHDLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQHVTKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRERPGLGSENTDRGSNNNVMSNYEAYKPSTGAMGDRLTAMKAAFQSQYKSHFVAASLTNQKAGSSAAGASGWTSAGSLNSVPSSSAQQGRNSPDSPTSSATKGIPGFGSAGNLSSAPVTYPPAGAQGVNNTASGNNSREGIGGGNGKRERYTENRGGSRHSHGESGNRHGDSPRHGDGARHGEGYRYPESSSRHADGRRHADGHPHGENRHGGGGGRHGESRGANDGRNGESRKESCTRESKMDPKVDSTKTDKTDSKTDKTTDGFAVPEPPKRKKSRWDS*