Sequence details bmy_17561 (Coding sequence)

Part of scaffold_1579 (Scaffold)

For more information consult the page for scaffold_1579 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CCDC47 ENSTTRG00000001675 (Bottlenosed dolphin)

Gene Details

coiled-coil domain containing 47

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001580, Bottlenosed dolphin)

Protein Percentage 92.01%
cDNA percentage 93.3%
Ka/Ks Ratio 0.56038 (Ka = 0.0388, Ks = 0.0693)

CCDC47 ENSBTAG00000011834 (Cow)

Gene Details

Coiled-coil domain-containing protein 47

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000015705, Cow)

Protein Percentage 73.9%
cDNA percentage 78.11%
Ka/Ks Ratio 0.41567 (Ka = 0.2143, Ks = 0.5155)

CCDC47  (Minke Whale)

Gene Details

coiled-coil domain containing 47

External Links

Gene match (Identifier: BACU006130, Minke Whale)

Protein Percentage 93.41%
cDNA percentage 94.05%
Ka/Ks Ratio 0.64 (Ka = 0.0569, Ks = 0.0889)

Additional orthologs identified in other species via the OPTIC pipeline.

CCDC47 (Human)   Ccdc47 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1095 bp    Location:138238..152568   Strand:+
Raw sequence 
>bmy_17561
ATGTTTGTGGAGGGAGATACCGAGAGTGAACCATATGATGATGAAGAATTTGAAGGTTATGAAGACAAACCAGATACTTCTTCTAGCAAAAATAAAGACCCAATAACAATTGTCGATGTTCCTGCACACCTCCAGAACAGTTGGGAGAGTTATTATCTAGAGATTTTAATGGTGACTGGTCTGCTTGCCTACATCATGAATTATATCATCGGGAAGAATAAAAACAGTCGCCTTGCTCAGGCCTGGTTTAACACTCATAGGGAGCTTTTGGAGAGCAACTTTACCTTAGTAGGGGATGATGGAACTAATAAAGAAGCCACCAGCACAGGAAAGCTGAACCAGGAGAATGAGCACATTTACAACCTGTGGTGTTCTGGTCGAGTGTGCTGTGAGGGGATGCTTATCCAGCTGAGGTTCCTCAAGAGACAGGACTTATTGAATGTCCTGGCCCGGATGATGAGGCCAGTGAGTGATCAAGTGAGTGAGTTTTGTAGTGACAAACCTAAGTCTGGAGCGAAGTATGGACTGCCTGACTCCTTGGCCATCCTGTCAGAGATGGGAGAAGTCACAGAGGGAATGATGGATACAAAGATGGTTCACTTTCTTACACACTATGCTGACAAGATTGAATCTGTTCATTTTTCAGACCAGTTCTCTGGTCCAAAAATTATGCAAGAGGAAGGTCAGCCTTTAAAGCTACCTGACACTAAGAGGACACTATTGTTTACATTTAATGTGCCTGGCTCAGGTAACACTTACCCAAAGGATATGGAGGCTTTACTACCCCTGATGAACATGGTGATTTATTCTATTGATAAAGCCAAAAAGTTTCGACTCAACAGAGAAGGCAAACAAAAAGCAGACAAGAACCGAGCTCGAGTGGAGGAGAACTTCTTGAAGCTGACGCATGTGCAGAGACAGGAAGCTGCCCAGTCTCGGCGTGAGGAGAAGAAAAGAGCAGAGAAGGAGCGAATCATGAATGAGGAAGATCCTGAGAAACAGCGCAGGCTGGAGGAAGCTGCCTTGAGGCGTGAGCAAAAGAAATTGGAGAAGAAGCAAATGAAAATGAAACAAATCAAAGTGAAAGCCATGTAA

Related Sequences

bmy_17561T0 Protein

Length: 365 aa      View alignments
>bmy_17561T0
MFVEGDTESEPYDDEEFEGYEDKPDTSSSKNKDPITIVDVPAHLQNSWESYYLEILMVTGLLAYIMNYIIGKNKNSRLAQAWFNTHRELLESNFTLVGDDGTNKEATSTGKLNQENEHIYNLWCSGRVCCEGMLIQLRFLKRQDLLNVLARMMRPVSDQVSEFCSDKPKSGAKYGLPDSLAILSEMGEVTEGMMDTKMVHFLTHYADKIESVHFSDQFSGPKIMQEEGQPLKLPDTKRTLLFTFNVPGSGNTYPKDMEALLPLMNMVIYSIDKAKKFRLNREGKQKADKNRARVEENFLKLTHVQRQEAAQSRREEKKRAEKERIMNEEDPEKQRRLEEAALRREQKKLEKKQMKMKQIKVKAM*