Sequence detailsbmy_17581 (Coding sequence)

Part of scaffold_1534 (SequenceType object (1))

For more information consult the page for scaffold_1534 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

FAM178AENSTTRG00000015107 (Bottlenosed dolphin)

Gene Details

family with sequence similarity 178, member A

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000014321, Bottlenosed dolphin)

Protein Percentage 67.64%
cDNA percentage 67.9%
Ka/Ks Ratio 0.27229 (Ka = 0.0169, Ks = 0.0622)

C26H10ORF6ENSBTAG00000012077 (Cow)

Gene Details

protein FAM178A

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000048207, Cow)

Protein Percentage 89.79%
cDNA percentage 92.19%
Ka/Ks Ratio 0.36498 (Ka = 0.0598, Ks = 0.1639)

FAM178A (Minke Whale)

Gene Details

family with sequence similarity 178, member A

External Links

Gene match (Identifier: BACU012393, Minke Whale)

Protein Percentage 98.34%
cDNA percentage 98.96%
Ka/Ks Ratio 0.38347 (Ka = 0.0072, Ks = 0.0189)

Additional orthologs identified in other species via the OPTIC pipeline.

FAM178A (Human)   Fam178a (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 3081 bp    Location:282517..321419   Strand:+
Raw sequence 
>bmy_17581
ATGACAAGGCGCTGCATGCCCGCTAGGCCAGGTTTCCCCTCATCCCCAGCCCCGGGGTCGTCGCCCCCGCGCTGCCATCTGAGACCCGGTAGTACCGCCCCTGCTGCAGCGGGAAAGAGAACAGAGAGTCCTGGGGACAGGAAGCAGTCAATTATAGATTTCTTCAAACCAGCTTCAAAACAAGATAGACATATGTTGGATTCTCCACAAAAATCGAACATCAAATATGGAGAAAGTGGATTGTCCATCAGTGGGACAGAGCAGTTTGAAAGGAAACTATCCTCACCAAAAAGATCTAAACCCAAAAGGGTGCCATCAGAAAAGAGCCCCGTCTTAGAGGCATTCATGAAAGGTGTTAAAGAGCACCATAGAGATCATGGTGTACATGAGTCACATCAGCCTTGTGTGTCACTGGCCACCAAATGTCCAAAGGCAGTTACAAAATACGTTCCTCCTTCATATCTCTTGTCAAAAGAGACGAAGAAGAAACATCAGTCTCCAGAGGGAAGGAAGTCACATTTCATTCATGAAAATAACAGGGAGAAGAATGATGGAGATCGAGGCAAAATCAGTGCAGATTCTAAAAAGCAGGCCGCGGTGACAGAAGCTGACATCTTCAAGAACAGCTCCAGAAGTCTTAGCAGCAGGAGCAGCCTATCCAGGCACCACCCAGGAGAAAGCCCACTGGGAGCTAAGTTCCAGTTGTCTCTAGCTTCTTACTGCAGAGAAAGAGAACTAAAGAGGTTGAGAAGGGAGCAAATGGAGCAGAGAATCAACTCAGAAAATTCTTTCTCAGCAGCAAGCACTCTTTCCTTAAAATCCTCTAGTATAGGAAGAAGATGCAAACCAAGGCAGGAACAGAGTAAACAGAATGATGTCACAGCCGGAAATAGTAATCTTTCAAACCTGGAAAATGGACCTCTCTCAAGAAAAAGATCCTCTTCTGATTCATGGGAACCTGCTTCAGCAGGCTCTAAGCAGAATAAATTCCCTGACAAAAGAAAAAGGAACTCTGTGGACTCAGATCTGAAAAGCACAAGAGAATCTATAATGCCAAAAGCAAAAGAGTCCTTCCTTGAGAAGCGTCCTGATGGACCACATCAGAGAGAAAAATTTATAAAACATATTGCACTGAAGACACCTGGWGGTGTATTGCGCTTGGAAGATATATCCAAGGAACCGAATGAAGAAGCTGATTGCTCCTCTGCAGGCTTGGCACCTTCAAATTCTGGGCACCATTCTTCCAGGAATAGTGACCAAATTCGTGTGGCAAGTACCAAAGAGACTAAGATACAGAAACCCCACTTATCTTTACCTCAGGAAAAGTCTGCAGTTAAAAAAGCTAGCAACCTTCAGAAAAATAAAACTGCTAGCTCTGTGGCATCACAGGAGACAAAACTTCTACCTTTACTTTCCCATGTTCCAAGTGCTGGTTCCTCTCGGGTTCCGTTAAATGCTAAAAATTGCACTCTTCCAGTTCCTAAAAAAGATAAAGAGCGTTCCTCATCTAAAGAATGTTCTGGGCATTCTACAGAGTCCTCCAAACACAAGGAACACAAAGCAAAGACTAATAAGGCTGATTCTAACGTAYCTACAGGGAAAATCTGTGGGGGATCTTTGCGTTCAGAATATGGCACTCCTACAAAGTCTCCCCCGGCTGCTTTGGAAGTTGTGCCATGTATTCCGAGCCCAACAGCACCTTCAGATAAAGCCCCTTCAGATAAAGAGAGTTCAGGAAATTCCAATGCAGGTAGCAATGCACTGAAAAGAAAACTAAGGGGTGATTTTGATAGTGATGAAGAAAGTTTAGGTTATAACCTAGACAGTGATGAGGAAGAGGAAACATTAAAATCACTGGAAGAAATAATGGCTTTGAACTTCAATCAGACTCCTGCAACTACAGGAAAGCCTCCTGCTCTTTCTAAGGGGCTTAGATCTCAGTCATCAGACTATACAGAACATGTTCATAGTGGAACTTATACAAATACTCTAGAGCGTCTAGTGAAGGAGATGGAAGACACACAAAGAGAATTTCTAAAGAAATTTTCAGTTACAATTGATGCTATTCCTGATCATCATCCAGGCGAAGAAATATTTAATTTCCTTAATTCTGGAAAAATTTTCAATCAGTATACCTTGGATTTAAGAGACTCTGGTTTTATCGGACAAAGTGCTGTAGAAAAGCTTATTCTTAAATCAGGAAAAACAGATCAGATTTTTTTGACAACACAAGGCTTCCTTACCTCTGCTTATCACTATGTCCAGTGTCCTGTACCTGTGTTAAAGTGGCTGTTTCGGATTTTAAGTACATTAATGGAAATAACAATAAGAAATGATACCTTCAGTGATTCACCAGTTTGGCCTTGGATTCCATCATTGTCTGATATAGCTGCTGTGTTTTTCAATATGGGAATTGATTTTAAATCTTTGTTTCCTCTGGAGAATCTTCAGCCAGACTTTAATGAAGATGATCTAGTTTCTGAAACACAGATGACACTGGGGGTGAAAGGAAGTGAAGATTCATCTTGTAAGCCAATATTTTCATCTCTCCCTGAAACCAACATTTTAAATGTGGTCAAGTTTCTAGGCTTGTGTACATCTATACATCCGGAAGGTTACCAGGATTGTGAAATAATGTTACTGATTTTAATGTTGTTTAAAATGAGTCTGGAGAAACAACTGAAACAGATTCCTCTAGTGGACTTTCAAAGCCTCCTGATAAACCTGATGAAAAACATCAGAGATTGGAATACAAAGGTGCCTGAACTCTGTCTGGCCATAAATGAACTCTCCAGCCATCCCCACAACCTTCTGTGGTTGGTACAGCTGGTCCCTAACTGGACATCACGTGGAAGAGTTGTTTTCATCCCTTGCATTTGTTTTACACAGAAACACTTTGTGCACCTCTGTGGGGCTTTAGAAAAGCATGTTAAGTGTGATATTAGGGAAGATGCAAGACTGTTTTATAGAACTAAGGTAAAAGACTTGGTTGCCAGGATACATGGAAAATGGCAGGAAATAATCCAGAACTGTCGGCCTACTCAGGGGCAGCTTCATGACTTCTGGGTACCAGATTCTTAA

Related Sequences

bmy_17581T0 SequenceType object (3)

Length: 1027 aa      View alignments
>bmy_17581T0
MTRRCMPARPGFPSSPAPGSSPPRCHLRPGSTAPAAAGKRTESPGDRKQSIIDFFKPASKQDRHMLDSPQKSNIKYGESGLSISGTEQFERKLSSPKRSKPKRVPSEKSPVLEAFMKGVKEHHRDHGVHESHQPCVSLATKCPKAVTKYVPPSYLLSKETKKKHQSPEGRKSHFIHENNREKNDGDRGKISADSKKQAAVTEADIFKNSSRSLSSRSSLSRHHPGESPLGAKFQLSLASYCRERELKRLRREQMEQRINSENSFSAASTLSLKSSSIGRRCKPRQEQSKQNDVTAGNSNLSNLENGPLSRKRSSSDSWEPASAGSKQNKFPDKRKRNSVDSDLKSTRESIMPKAKESFLEKRPDGPHQREKFIKHIALKTPGGVLRLEDISKEPNEEADCSSAGLAPSNSGHHSSRNSDQIRVASTKETKIQKPHLSLPQEKSAVKKASNLQKNKTASSVASQETKLLPLLSHVPSAGSSRVPLNAKNCTLPVPKKDKERSSSKECSGHSTESSKHKEHKAKTNKADSNVXTGKICGGSLRSEYGTPTKSPPAALEVVPCIPSPTAPSDKAPSDKESSGNSNAGSNALKRKLRGDFDSDEESLGYNLDSDEEEETLKSLEEIMALNFNQTPATTGKPPALSKGLRSQSSDYTEHVHSGTYTNTLERLVKEMEDTQREFLKKFSVTIDAIPDHHPGEEIFNFLNSGKIFNQYTLDLRDSGFIGQSAVEKLILKSGKTDQIFLTTQGFLTSAYHYVQCPVPVLKWLFRILSTLMEITIRNDTFSDSPVWPWIPSLSDIAAVFFNMGIDFKSLFPLENLQPDFNEDDLVSETQMTLGVKGSEDSSCKPIFSSLPETNILNVVKFLGLCTSIHPEGYQDCEIMLLILMLFKMSLEKQLKQIPLVDFQSLLINLMKNIRDWNTKVPELCLAINELSSHPHNLLWLVQLVPNWTSRGRVVFIPCICFTQKHFVHLCGALEKHVKCDIREDARLFYRTKVKDLVARIHGKWQEIIQNCRPTQGQLHDFWVPDS*