Part of scaffold_1534 (Scaffold)

For more information consult the page for scaffold_1534 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SEMA4G ENSTTRG00000015109 (Bottlenosed dolphin)

Gene Details

sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014322, Bottlenosed dolphin)

Protein Percentage 95.23%
cDNA percentage 94.83%
Ka/Ks Ratio 0.12768 (Ka = 0.0056, Ks = 0.0437)

SEMA4G ENSBTAG00000018604 (Cow)

Gene Details

semaphorin-4G precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000024759, Cow)

Protein Percentage 95.58%
cDNA percentage 93.98%
Ka/Ks Ratio 0.10232 (Ka = 0.0211, Ks = 0.2066)

SEMA4G  (Minke Whale)

Gene Details

sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G

External Links

Gene match (Identifier: BACU012392, Minke Whale)

Protein Percentage 98.41%
cDNA percentage 99.12%
Ka/Ks Ratio 0.59066 (Ka = 0.0072, Ks = 0.0122)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1698 bp    Location:328432..343759   Strand:+
>bmy_17582
ATGTGGGGGAGGCTCTGGCCCCTCCTCCTGAGTTTCCTCACAGCAACTGCAGTCCCTGGACCTTCGCTGCGGAGACCATCCAGAGAACTAGATGCCACCCCGCGGATAACCATCCCCTACGAAGAGCTCTCCGGGACCCAGCACTTCAAGGGTCGAGCCCAGAACTACTCAACGCTGCTGCTGGAGGAGGCCTCAGCAAGGCTGCTGGTGGGAGCCCGAGGCGCCCTGTTCTCTCTCAATGCCCACARCATAGGAGACGGGACTCACAAAGAGATTCACTGGGAGGCCTCCCCAGAGATGCAAAGCAAATGTCATCAAAAAGGGAAAAACAACCAGACCGAGTGCTTCAACCACGTGCGATTCCTACAGCGCCTCAATGCCACTCACCTCTATGCGTGCGGGACTCACGCCTTCCAGCCTCTCTGTGCAGCCATTGATGCTGAGGCCTTCACCTTGCCAACCAGCTTTGAGGAGGGGAAGGAGAAGTGTCCTTATGACCCAGCCCGTGGCTTCACAGGCCTCATCATTGATGGAGGCCTCTACACAGCTACTCGGTATGAATTCCGGAGCATCCCTGACATCCGCCGGAGCCGCCACCCGCACTCCCTGAGGACTGAGGAGGCACCAATGCACTGGCTCAATGATGCTGAGTTTGTGTTCTCTGTCCTGGTGCGGGAGAGCAAGGCCAGTGCAGTGGGTGACGACGACAAGGTTTACTACTTCTTCACGGAGCGTGCTGCTGAGGAGGGCTCTGGAAGCTTTGCTCAGAGCCGCAGCAGCCACCGTGTGGCCCGTGTGGCCCGTGTGTGCAAGGGAGACCTGGGAGGGAAGAAGATCCTGCAGAAGAAGTGGACCTCCTTCTTAAAGGCGCGTCTCATCTGCCACATTCCACAGTATGAGACACTACGTGGTGTCTGCAGTCTGGAAGCTGACACCTCAGCCCGCACGCACTTCTATGCGGCCTTCACGCTGACCACACAGTGGAAGACCCTGGAGGCCTCAGCCATCTGCCGCTACGACCTGGCCGAGGTGCAGGCTGTCTTCGCAGGCCCCTACATGGAATACCAGGATGGTGTCCGACGCTGGGGCCGCTACGAGGGAGGGGTGCCGGAGCCCCGGCCTGGCTCATGCATTACAGATTCATTGCGCAGCCGAGGCTACAACTCATCCCAGGACTTGCCATCTCTGGTCCTGGACTTTGTGAAGTTACACCCACTGATGGCTCGGCCCGTGGTACCCACACGCGGACGGCCCCTGCTGCTCAAACGCAGTGTGCGCTACACACACCTCACGGGGACACCTGTCACCACGCCAGCTGGACCCACCTATGACTTGCTCTTTCTGGGCACAGCTGATGGCTGGATCCACAAGGCAGTGGTCCTGGGCTCTGGGATGCACATTATTGAGGAGACACAGGTGTTCAAGAAGCCCCAGTCTGTGGAGAACCTGGTCATCTCTCCGACGCAGCATAGCCTCTACGTGGGGGCCCCTAGTGGAGTCATCCAGCTATCACTGTCCAGCTGCTCCCGCTACCGCTCCTGCTACGACTGCATCCTGGCCCGGGACCCCTACTGTGGCTGGGACCCCGGCACCCATGCCTGCGTGGTGACCACCACCGGAGCCAACAGGACAGCACTGATACAGGACATAGAGAGAGGAAACCGAGGCTGTGAGGGCAACAGGGACACAGGTAAGTGA

Related Sequences

bmy_17582T0 Protein

Length: 566 aa      View alignments
>bmy_17582T0
MWGRLWPLLLSFLTATAVPGPSLRRPSRELDATPRITIPYEELSGTQHFKGRAQNYSTLLLEEASARLLVGARGALFSLNAHXIGDGTHKEIHWEASPEMQSKCHQKGKNNQTECFNHVRFLQRLNATHLYACGTHAFQPLCAAIDAEAFTLPTSFEEGKEKCPYDPARGFTGLIIDGGLYTATRYEFRSIPDIRRSRHPHSLRTEEAPMHWLNDAEFVFSVLVRESKASAVGDDDKVYYFFTERAAEEGSGSFAQSRSSHRVARVARVCKGDLGGKKILQKKWTSFLKARLICHIPQYETLRGVCSLEADTSARTHFYAAFTLTTQWKTLEASAICRYDLAEVQAVFAGPYMEYQDGVRRWGRYEGGVPEPRPGSCITDSLRSRGYNSSQDLPSLVLDFVKLHPLMARPVVPTRGRPLLLKRSVRYTHLTGTPVTTPAGPTYDLLFLGTADGWIHKAVVLGSGMHIIEETQVFKKPQSVENLVISPTQHSLYVGAPSGVIQLSLSSCSRYRSCYDCILARDPYCGWDPGTHACVVTTTGANRTALIQDIERGNRGCEGNRDTGK*