Part of scaffold_1535 (Scaffold)

For more information consult the page for scaffold_1535 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

EPCAM ENSTTRG00000004235 (Bottlenosed dolphin)

Gene Details

epithelial cell adhesion molecule

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003983, Bottlenosed dolphin)

Protein Percentage 95.49%
cDNA percentage 96.3%
Ka/Ks Ratio 0.45291 (Ka = 0.03, Ks = 0.0663)

EPCAM ENSBTAG00000006474 (Cow)

Gene Details

epithelial cell adhesion molecule precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000008487, Cow)

Protein Percentage 93.79%
cDNA percentage 93.79%
Ka/Ks Ratio 0.25087 (Ka = 0.0372, Ks = 0.1482)

EPCAM  (Minke Whale)

Gene Details

epithelial cell adhesion molecule

External Links

Gene match (Identifier: BACU013888, Minke Whale)

Protein Percentage 98.37%
cDNA percentage 98.69%
Ka/Ks Ratio 0.36579 (Ka = 0.0091, Ks = 0.0249)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1122 bp    Location:356866..367634   Strand:+
>bmy_17593
AAGCGCGCAGTCCGTCGGCCAGCTCGCACCGTGCTTTCGGCCCCGGGGCACCTAGCTGTCGTCCTCCCGACGCGCGCGTCCCAGGCCTCGTGCCGTGCCGCCGGCCAGTGGGCTCCCGGCGGCCTACTCTGTCCGCGCGTCCTCCCGCGAGCCCCCGGCCCGCTTCGAGCCCCTCGCGCCCTTGTCCTCGGCGCGCGCAGCATGGCGCCCCCCCACGTCCTTGCGTTCGGGCTCCTGCTCGCCGCAGCGACGGCGGCGGTGGCCGCGGCCCAGGAAGGATGTGTGTGTGAAAACTACAAACTGACCACAAACTGCTCTGTGAATGCGCATGGTCAGTGCCAGTGTACTTCAATCGGTACACAACATTCCGTCATTTGCACAAAACTGGCTGCCAAATGTTTGGTGATGAAGGCAGAAATGAGTGGGTCAAAGGCTGGGAGAAGAGTGAAACCAGAGGGTGCTATCCAGAATAATGACGGGCTCTATGATCCCGAGTGTGACGACAAGGGGCTCTTTAAAGCCAAGCAGTGCAATGGCACCTCCACGTGCTGGTGTGTGAACACTGCTGGGGTCAGAAGAACCGATAAGGACAGTGAAATATCCTGCTCCGAGCTAGTGAGGACCTTCTGGATCATCATTGAACTAAAACACAAGACAAGAGAAAAACCTTATGATGTTCAAAGTTTACAGGCTCGTTATCAACTGGATCCAAAATATATCACAAATATTCTGTATGAGAATGATGTTATCATTATTGACCTGGTACAAAATTCTTCTCAGAAAACTCAGAATGATGTGGACATAGCTGATGTGGCTTATTATTTTGAAAAAGATGTTAAAGATGAGTCCTTGTTCCAGTCCAAAAGGATGGACCTGAGAGTAAATGGGGAACTACTGGATCTGGATCCTGGTCGAACTTCAATTTACTATGTTGATGAAAAACCACCTGAATTTTCAATGCAGGGTCTACAAGCTGGTATTATTGCTGTCATTGTGGTTGTGGCAGTAGCAATTATTGCTGGAATTGCTGTGCTGGTTGTTTCCAGAAAGAAAAGAATGGCAAAATATGAGAAAGCTGAGATAAAGGAGATGGGTGAAATGCATAGGGAACTCAATGCATAA

Related Sequences

bmy_17593T0 Protein

Length: 374 aa      View alignments
>bmy_17593T0
KRAVRRPARTVLSAPGHLAVVLPTRASQASCRAAGQWAPGGLLCPRVLPRAPGPLRAPRALVLGARSMAPPHVLAFGLLLAAATAAVAAAQEGCVCENYKLTTNCSVNAHGQCQCTSIGTQHSVICTKLAAKCLVMKAEMSGSKAGRRVKPEGAIQNNDGLYDPECDDKGLFKAKQCNGTSTCWCVNTAGVRRTDKDSEISCSELVRTFWIIIELKHKTREKPYDVQSLQARYQLDPKYITNILYENDVIIIDLVQNSSQKTQNDVDIADVAYYFEKDVKDESLFQSKRMDLRVNGELLDLDPGRTSIYYVDEKPPEFSMQGLQAGIIAVIVVVAVAIIAGIAVLVVSRKKRMAKYEKAEIKEMGEMHRELNA*