Part of scaffold_1571 (Scaffold)

For more information consult the page for scaffold_1571 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

BRIX1 ENSTTRG00000003262 (Bottlenosed dolphin)

Gene Details

BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003059, Bottlenosed dolphin)

Protein Percentage 97.45%
cDNA percentage 98.68%
Ka/Ks Ratio 0.43459 (Ka = 0.0107, Ks = 0.0247)

BRIX1 ENSBTAG00000019211 (Cow)

Gene Details

Ribosome biogenesis protein BRX1 homolog

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000025572, Cow)

Protein Percentage 94.9%
cDNA percentage 95.18%
Ka/Ks Ratio 0.16202 (Ka = 0.023, Ks = 0.1422)

BRIX1  (Minke Whale)

Gene Details

BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)

External Links

Gene match (Identifier: BACU015023, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.62%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.017)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1209 bp    Location:459417..451134   Strand:-
>bmy_17616
GCCGAGCGAGCCGTACCACAGAGACGGGAAAGAGGCACCATAGAGCAGGAGGAGCACTGCCGAGCCGAGCCCCGGGACCATAGAGATGGGAAAGCGGAGCGAGCGGCCGAGCCGGAAGGAAGGCCCAGAGTAAAGGCGGGGAGCAAGATGGCGGTGACGAAGAGGAAACGGCGTGGAGGCCCGGCGTTTCAGGCGAAAAAGCTAAAAAGAAACGAAAAAGATGCTAAGCCGCCTGCTAAGCCGAGCGACGTAGCAGAGGAGGCGGAGGAGGAAGAGAGAGATCGTATCCCAGGCCCGGTTTGCAAGGGCAAGTGGAAAAATAAGGAACGGATTCTCATCTTTTCTTCTAGAGGAATAAATTTCAGAACAAGACATTTAATGCAAGACTTGAGAATGTTGATGCCTCATTCTAAAGCAGATACTAAAATGGATCGTAAAGATAAGTTATTTGTGATTAACGAGGTTTGTGAAATAAAAAACTGCAATAAATGTATCTATTTTGAAGCTAAGAAAAAACAAGATCTCTATATGTGGCTTTCAAATTCACCTCATGGACCATCTGCTAAATTCCTTGTTCAAAATATTCATACCCTAGCTGAGCTGAAGATGACTGGAAACTGTTTGAAAGGTTCTCGGCCCCTCTTGTCTTTTGATCCTGCTTTTGATGAATTACCACATTTTGCTTTGTTAAAAGAACTCTTAATTCAGATCTTTAGTACACCACGGTATCATCCCAAAAGTCAACCATTTGTGGACCATGTGTTTACGTTCACTATTTTGGATAATAGGATATGGTTTCGGAACTTTCAGATCATAGAAGAAGATGCTGCTCTTGTAGAAATAGGACCCCGTTTTGTCTTAAATCTCATAAAGATTTTCCAGGGAAGTTTTGGAGGACCAACTTTGTATGAAAATCCTCACTACCAGTCACCAAACATGCATCGGCGTGTCATAAGATCCATCACAGCTGCAAAATACAGAGAGAAACAGCAAGTGAAAGACGTGCAGAAGCTGAGAAAGAAACAACCAAAGACTATTCTTCCCCATGATCCCACTGCAGATGTTTTTGTTACACCAGCTGAGGAAAAGCCGATAGAAATACAGTGGGTAAAACCAGAGCCAAAAGTAGATTTGAAAGCAAGAAAGAAAAGGATTTATAAAAGGCAAAGGAAAATGAAACAGAAGATGAACCGTGGGAATGCAAAATGA

Related Sequences

bmy_17616T0 Protein

Length: 403 aa      View alignments
>bmy_17616T0
AERAVPQRRERGTIEQEEHCRAEPRDHRDGKAERAAEPEGRPRVKAGSKMAVTKRKRRGGPAFQAKKLKRNEKDAKPPAKPSDVAEEAEEEERDRIPGPVCKGKWKNKERILIFSSRGINFRTRHLMQDLRMLMPHSKADTKMDRKDKLFVINEVCEIKNCNKCIYFEAKKKQDLYMWLSNSPHGPSAKFLVQNIHTLAELKMTGNCLKGSRPLLSFDPAFDELPHFALLKELLIQIFSTPRYHPKSQPFVDHVFTFTILDNRIWFRNFQIIEEDAALVEIGPRFVLNLIKIFQGSFGGPTLYENPHYQSPNMHRRVIRSITAAKYREKQQVKDVQKLRKKQPKTILPHDPTADVFVTPAEEKPIEIQWVKPEPKVDLKARKKRIYKRQRKMKQKMNRGNAK*