Part of scaffold_1571 (Scaffold)

For more information consult the page for scaffold_1571 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RAD1 ENSTTRG00000003263 (Bottlenosed dolphin)

Gene Details

RAD1 homolog (S. pombe)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003060, Bottlenosed dolphin)

Protein Percentage 94.87%
cDNA percentage 96.24%
Ka/Ks Ratio 0.49525 (Ka = 0.0314, Ks = 0.0634)

RAD1 ENSBTAG00000019209 (Cow)

Gene Details

cell cycle checkpoint protein RAD1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000025568, Cow)

Protein Percentage 95.38%
cDNA percentage 93.68%
Ka/Ks Ratio 0.13431 (Ka = 0.0266, Ks = 0.1978)

RAD1  (Minke Whale)

Gene Details

RAD1 homolog (S. pombe)

External Links

Gene match (Identifier: BACU015024, Minke Whale)

Protein Percentage 97.95%
cDNA percentage 97.95%
Ka/Ks Ratio 0.30712 (Ka = 0.0142, Ks = 0.0461)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 588 bp    Location:459422..468749   Strand:+
>bmy_17617
ATGCCCCTCCTAACCCAGCAGATCCCAGATGAGAATGATTACAGCTTAGTGGCCAGCCTTGACAACGTCAGGAATCTCTCCACTATCTTGAAGGCCATTCATTTCCGAGAACATGCCACGTGTTTCGCTACTAAAAATGGAATCAAGGTTACAGTGGAAAACGCAAAGTGTGTGCAAGCAAATGCTTTTATTCAGGCTGGAATATTTCAAGAGTTTCGAGTTCAAGAAGAGTCTGTTACTTTTCGAATTAATTTAACCGTCCTTTTAGACTGTTTATCTATTTTTGGATCAAACCCTATGCCAGGGACTTTAACTGCACTTAGGATGTGTTACCAAGGTTACGGTTACCCTTTGATGCTATTTCTGGAAGAAGGAGGAGTGGTGACAGTCTGTAAAATCAATACTCAGGAGCCCGAGGAGACTCTGGATTTCGATTTCTGCAGCACCAATGTCATTAATAAAATTATTCTGCAGTCAGAGGGACTCCGTGAAGCATTTTCCGAATTGGATATGACAAGTGAGGTCCTACAGATCACCATGTCTCCAGATAAACCTTATTTCAGGTACCTGAAAGCAGTACAGTTATAG

Related Sequences

bmy_17617T0 Protein

Length: 196 aa      View alignments
>bmy_17617T0
MPLLTQQIPDENDYSLVASLDNVRNLSTILKAIHFREHATCFATKNGIKVTVENAKCVQANAFIQAGIFQEFRVQEESVTFRINLTVLLDCLSIFGSNPMPGTLTALRMCYQGYGYPLMLFLEEGGVVTVCKINTQEPEETLDFDFCSTNVINKIILQSEGLREAFSELDMTSEVLQITMSPDKPYFRYLKAVQL*