Sequence details bmy_17628 (Coding sequence)

Part of scaffold_1538 (Scaffold)

For more information consult the page for scaffold_1538 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CLASP2 ENSTTRG00000016793 (Bottlenosed dolphin)

Gene Details

cytoplasmic linker associated protein 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015921, Bottlenosed dolphin)

Protein Percentage 96.91%
cDNA percentage 97.16%
Ka/Ks Ratio 0.48889 (Ka = 0.0232, Ks = 0.0474)

CLASP2 ENSBTAG00000011333 (Cow)

Gene Details

CLIP-associating protein 2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000015071, Cow)

Protein Percentage 95.38%
cDNA percentage 93.27%
Ka/Ks Ratio 0.16273 (Ka = 0.0329, Ks = 0.2019)

CLASP2  (Minke Whale)

Gene Details

cytoplasmic linker associated protein 2

External Links

Gene match (Identifier: BACU014640, Minke Whale)

Protein Percentage 97.6%
cDNA percentage 97.9%
Ka/Ks Ratio 0.47335 (Ka = 0.0174, Ks = 0.0368)

Additional orthologs identified in other species via the OPTIC pipeline.

CLASP2 (Human)   Clasp2 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 3402 bp    Location:51843..223914   Strand:+
Raw sequence 
>bmy_17628
ATGGAGAAAACAGTGTCATTAATGGGATTGGAAATTTTAAGTGCCTTCGTGGACAGATTATCAACACGATTTAAGTCCTATGTAGCAATGGTTATTGTAGCTTTAATAGACAGAATGGGAGATGCCAAAGACAAGGTTCGAGATGAAGCTCAGACTCTGATACTGAAGTTAATGGATCAAGTAGCACCACCTATGGTTAGAGATGCTGCAATATTGGCTGTGGTGGAGATTTATAGACATGTGGGAGAGAAAGTGAAAGTGGACCTTTGTAAGAGAGGAATTCCCCTTGCTAGATTAGAAATGATACTTGGCAAATTTGATGAAGTGCAAAATTCAGGTGGTATGATTTTGAGTGCCTGCAAAGATAAAAGCTTTGATGATGAAGAATCAGTGGATGGAAATAGGCCATCATCAGCTGCTTCAGCCTTCAAGGTTCCTGCACCTAAAACATCCGGAAATCCTGTCAACAGTGCAAGGAAGCCTGGTTCAGCAGGTGGCCCTAAGGTTGGAGGTGCTTCTAAGGAAGGAGGTGCCGGAGCAGTTGATGAAGATGATTTTATAAAGGCTTTTACAGATGTCCCTTCTATACAGATCTATTCTAGTCGAGAACTTGAAGAAACATTAAATAAAATCAGGGAAATTTTGTCAGATGACAAACACGACTGGGATCAGCGTGCCAATGCATGCAAAAGTCATGGCAACTTCTGGATGTGCAGCAATCAGATTCATAATTCGGTATCAGCAGGCAGCAGCAAAGCCAGTTCCCTTCCAGGAAGCCTACAGCGTTCACGAAGTGATATTGATGTGAATGCTGCTGCTGGTGCCAAGGCACATCATGCTGCTGGGCAGGCTGTACGAAGTGGGCGGTTAGGTGCAGGTGCCCTGAATCCAGGTTCCTACGCATCACTAGGAACAGCATCTGAAGATGCTGGCAGCCGGTCTGGGTCTCCGGGAAGAGTTCTGACCACAACAGCCCTCTCCACTGTGAGCTCTGGTGTTCAAAGAGTCCTGGTCAATTCAGCCTCAGCACAGAAGAGAAGCAAGATACCACGAAGCCAGGGCTGTAGCAGAGAGGCTAGTCCATCTAGGCTCTCAGTGGCCCGAAGCAGTCGTATTCCTCGACCAAGTGTGAGTCAAGGGTGCAGCCGGGAAGCCAGTCGGGAGAGCAGCAGGGATACGAGTCCTGTTCGCTCTTTTCAGCCCCTTGGTCCAGGGTATGGGATCAGCCAATCAAGCCGACTGTCATCCTCTGTCAGTGCCATGCGAGTCCTGAACACAGGTTCCGACGTGGAGGAGGCAGTAGCAGATGCCTTGCTCTTAGGAGACATACGGACTAAGAAAAAACCTGCTCGAAGAAGATATGAATCATATGGGATGCATTCAGATGATGATGCCAACAGCGATGCATCCAGTGCTTGTTCAGAACGCTCCTATAGCTCTCGGAATGGTAGTATTCCTACATACATGAGGCAGACAGAAGATGTGGCAGAAGTCCTCAACAGATGTGCTAGCTCCAACTGGTCAGAAAGGAAAGAAGGCCTCCTGGGTCTGCAGAACTTACTAAAAAATCAGAGAACGCTAAGTCGAGTTGAACTGAAAAGATTATGTGAAATTTTCACAAGAATGTTTGCTGATCCTCATGGCAAGGTGTTCAGCATGTTTTTGGAGACTTTAGTGGACTTCATACAAGTCCACAAAGATGATCTTCAAGATTGGTTGTTTGTACTGCTGACCCAACTACTAAAAAAAATGGGTGCTGATTTGCTTGGGTCTGTTCAAGCAAAAGTTCAGAAAGCCCTCGATGTTACAAGAGAATCTTTTCCAAATGATCTTCAGTTCAATATTCTAATGAGATTTACAGTTGATCAGACCCAGACACCAAGCTTGAAGGTGAAGGTTGCTATCCTCAAATACATAGAAACTCTGGCCAAACAGATGGATCCAGGAGATTTTATAAATTCCAGTGAAACTCGCCTGGCAGTGTCTCGGGTCATCACTTGGACAACAGAACCCAAAAGTTCTGATGTTCGGAAGGCGGCGCAGTCAGTCCTGATTTCCTTATTTGAACTCAATACCCCAGAGTTTACAATGTTATTAGGAGCTTTACCAAAAACTTTTCAGGATGGTGCTACCAAGCTTCTTCATAATCACCTTCGAAACACTGGCAATGGAACCCAGGGTTCCATGGGGAGTCCTTTGACAAGACCAACACCACGGTCACCTGCCAACTGGTCCAGTCCTCTTACTTCTCCTACCAACACGTCACAGAATACTTTATCTCCAAGTGCATTTGATTATGACACAGAAAATATGAATTCTGAAGATATTTATAGCTCTCTTAGAGGTGTCACTGAAGCAATTCAGAATTTCAGCTTCCGCAGTCAAGAAGATATGAATGAGCCATTGAAAAGGGATTCTAAAAAAGATGAAGGCGATTCAACATGTGGCGGTCCTGGGATGTCTGACCCAAGAGCAGGAGGTGATGCTACTGACTCAAGCCAAACAGCCCTTGATAATAAAGCTTCATTGCTCCATTCGATGCCTGCTCACTCCTCTCCACGCTCTCGAGACTATAATCCGTATAACTACTCAGATAGCATCAGTCCCTTCAATAAGTCTGCCCTCAAGGAAGCCATGTTTGATGATGATGCTGACCAGTTTCCTGATGATCTTTCCCTAGACCATTCTGACCTGGTTGCAGAGTTATTGAAGGAGTTGTCTAACCATAATGAACGTGTAGAAGAAAGAAAAATCGCCCTCTATGAACTCATGAAACTGACACAGGAAGAATCTTTCAGTGTTTGGGATGAACACTTCAAAACAATATTACTTTTATTGCTTGAAACCCTTGGGGATAAAGAGCCTACAATCAGGGCTTTGGCATTAAAGGTTTTAAGAGAAATCCTAAGGCATCAACCAGCAAGATTTAAAAACTATGCAGAACTGACTGTCATGAAAACACTGGAAGCACATAAAGATCCTCATAAGGAGGTGGTGAGATCTGCTGAGGAAGCTGCGTCAGTGTTGGCCACTTCAATCAGTCCGGAGCAGTGCATCAAAGTGCTTTGTCCCATCATCCAAACTGCAGATTACCCAATTAATCTGGCTGCAATCAAAATGCAAACAAAAGTGATAGAGAGAGTTTCCAAGGAGACCCTTAACCTGCTTTTGCCAGAGATTATGCCAGGCCTAATACAGGGTTATGATAATTCGGAGAGCAGTGTTCGGAAAGCTTGCGTCTTCTGCCTGGTGGCTGTTCATGCAGTAATTGGTGATGAACTAAAACCACATCTCAGCCAGCTCACTGGCAGTAAAATGAAGCTACTGAATCTTTACATCAAACGCGCACAAACAGGTTCTGGAGGAGCTGATCCCACTACTGATGTTTCTGGACAAAGTTAG

Related Sequences

bmy_17628T0 Protein

Length: 1134 aa      View alignments
>bmy_17628T0
MEKTVSLMGLEILSAFVDRLSTRFKSYVAMVIVALIDRMGDAKDKVRDEAQTLILKLMDQVAPPMVRDAAILAVVEIYRHVGEKVKVDLCKRGIPLARLEMILGKFDEVQNSGGMILSACKDKSFDDEESVDGNRPSSAASAFKVPAPKTSGNPVNSARKPGSAGGPKVGGASKEGGAGAVDEDDFIKAFTDVPSIQIYSSRELEETLNKIREILSDDKHDWDQRANACKSHGNFWMCSNQIHNSVSAGSSKASSLPGSLQRSRSDIDVNAAAGAKAHHAAGQAVRSGRLGAGALNPGSYASLGTASEDAGSRSGSPGRVLTTTALSTVSSGVQRVLVNSASAQKRSKIPRSQGCSREASPSRLSVARSSRIPRPSVSQGCSREASRESSRDTSPVRSFQPLGPGYGISQSSRLSSSVSAMRVLNTGSDVEEAVADALLLGDIRTKKKPARRRYESYGMHSDDDANSDASSACSERSYSSRNGSIPTYMRQTEDVAEVLNRCASSNWSERKEGLLGLQNLLKNQRTLSRVELKRLCEIFTRMFADPHGKVFSMFLETLVDFIQVHKDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRESFPNDLQFNILMRFTVDQTQTPSLKVKVAILKYIETLAKQMDPGDFINSSETRLAVSRVITWTTEPKSSDVRKAAQSVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHLRNTGNGTQGSMGSPLTRPTPRSPANWSSPLTSPTNTSQNTLSPSAFDYDTENMNSEDIYSSLRGVTEAIQNFSFRSQEDMNEPLKRDSKKDEGDSTCGGPGMSDPRAGGDATDSSQTALDNKASLLHSMPAHSSPRSRDYNPYNYSDSISPFNKSALKEAMFDDDADQFPDDLSLDHSDLVAELLKELSNHNERVEERKIALYELMKLTQEESFSVWDEHFKTILLLLLETLGDKEPTIRALALKVLREILRHQPARFKNYAELTVMKTLEAHKDPHKEVVRSAEEAASVLATSISPEQCIKVLCPIIQTADYPINLAAIKMQTKVIERVSKETLNLLLPEIMPGLIQGYDNSESSVRKACVFCLVAVHAVIGDELKPHLSQLTGSKMKLLNLYIKRAQTGSGGADPTTDVSGQS*