Part of scaffold_1561 (Scaffold)

For more information consult the page for scaffold_1561 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

AFF4 ENSTTRG00000014729 (Bottlenosed dolphin)

Gene Details

AF4/FMR2 family, member 4

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013968, Bottlenosed dolphin)

Protein Percentage 98.3%
cDNA percentage 98.27%
Ka/Ks Ratio 0.34993 (Ka = 0.0126, Ks = 0.0359)

AFF4 ENSBTAG00000009482 (Cow)

Gene Details

AF4/FMR2 family member 4

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000012480, Cow)

Protein Percentage 97.5%
cDNA percentage 96.28%
Ka/Ks Ratio 0.15682 (Ka = 0.0167, Ks = 0.1065)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 3378 bp    Location:327913..266616   Strand:-
>bmy_17666
ATGAACCGTGAAGACCGGAATGTGCTGCGTATGAAAGAACGGGAAAGGCGGAATCAAGAAATTCAGCAGGGGGACGACGCCTTCCCACCTAGCTCTCCTCTCTTTGCTGAGCCATACAAAGTTACTAGCAAAGAAGATAAGCTCTCAAGTCGTATTCAGAGTATGCTTGGAAACTACGATGAAATGAAGGATTTCATAGGAGACAGATCTATACCAAAGCTTGTTGCAATTCCCAAGCCTACAGTACCGCCGACAGCAGATGAAAAATCTAACCCAAATTTCTTTGAACAGAGACATGGGAGCTCTCATCAGAGTAGCAAATGGACTCCAGTAGGACCTGCACCCAGCACTTCTCAGTCTCAGAAACGGTCCTCAGGCTTACAGAGTGGACACAGTAGCCAGCGGGCCAGTGCAGGTGCCAGTAGTGGCGCTAATAGCAGTGGCCAGAGGCATGACCGTGACTCATACAGCAGTGGTGGGAGCAGTAGCCGGAAAAAAGGCCAGCATGGATCAGAACACTCCAAATCACGCTCTTCCAGCCCTGGAAAACCCCAGGCTGTTTCTTCATTAAGCTCCAGTCATTCCAGGTCTCATGGGAATGATCACCATAGCAAGGAACATCAGCGTTCCAAATCACCTCGGGACCCTGATGCAAACTGGGATTCTCCTTCCCGTGTACCGTTTTCAAGTGGGCAGCACTCAAATCAGTCTTTCCCACCTTCATTGATGTCAAAGTCCAGTTCAATGTTACAGAAACCCACTGCCTATGTGCGGCCTATGGATGGACAGGAATCCATGGAACCAAAACTGTCCTCTGAACACTACAGCAGCCAATCTCATGGCAACAGTATGACTGAACTAAAGCCCAGCAGCAAAGCTCATCTCACCAAGCTGAAAATACCTTCCCAACCATTGGATGAGTCTCAGCAGTCCAATTTTGGCCCTGGAGAACAAATTTGTGTGTATGCAATTAGAGAAAAGCTAGAGATAACAGAAGTGAGTATAAGAGTTTGTGGAAGTATGTTAAAAGATGACTTAAAACTAAGCAGCAGTGAAGACAGTGATGGGGAACAGGATTGTGATAAGACAATGCCAAGGAGTACACCTGGAAGTAACTCTGAACCTTCACACCATAATAGTGAAGGGGCAGATAACTCCAGGGATGATTCTAGCAGCCACAGTGGATCTGAAAGCAGCTCTGGATCTGACTCAGAGAGTGAAAGTAGTTCCAGTGACAGTGAGGCAAATGAGCCATCCCAGAGTGCATCTCCTGAGCCTGAACCACCACCCACAAACAAATGGCAACTTGATAATTGGCTGAATAAAGTGAACCCACATAAAGTGTCACCAGCTTCTTCTGTGGACAGTAATATCCCATCATCTCAAGGCTATAAAAAGGAAGGCCGAGAACAGGGCACAGGGAATAGCTATACTGATGCAGGTGGTCCTAAAGAAACAAGTTCTGCTACTCCTGGACGAGACTCCAAAACTGTCCAAAAGGGATCAGAGAGTGGGCGTGGGAGGCAGAAGTCCCCTGCACAGAGTGACAGCACAGCACAGAGGAGAACTGTAGGCAAAAAACAACCCAAAAAGACTGAGAAGGCAGCTGCTGAAGAGCCCCGCGGAGGCCTGAAGATAGAGAGTGAAACCCCTGTAGACATGGCTACCAGCATGCCCTCCAGCAGACACAAAGCAGCTACCAAAGGCTCAAGGAAACCCAATATAAAAAAGGAGTCCAAATCTTCCCCTCGACCTTCAGCAGAGAAAAAGAAATACAAGTCAACAAGCAAATCTTCTCAGAAATCAAGGGAAATCATAGAAACAGATACCTCATCCTCAGACTCGGATGAAAGCGAGAGCCTTCCTCCTTCCTCACAAACTCCTAAGTACCCTGAGAGTAATAGGACTCCCGTTAAGCCCTCCTCAGTGGAGGAAGAAGATAGCTTTTTTCGGCAACGAATGTTCTCTCCTATGGAAGAGAAGGAACTTCTTTCACCCCTCAGTGAGCCTGATGACAGGTATCCACTTATTGTGAAGATTGACCTGAATCTCTTGACTAGAATACCAGGAAAGCCTTACAAAGAAACAGAGACACCCAAGGGGGAAAAGAAAAATGTTCCAGAAAAGCACACAAGAGAGGCTCAGAAACAAGCCTCAGAAAAAGTTTCCAACAAAGGCAAAAGGAAACATAAGAATGAAGATGATAACAGAGCCAATGAGAGCAAGAAACCCAAAACGGAAGACAAGAATTCGGCAGGCCACAAGCCATCCAGCAACAAAGAGTCATCTAAACAGAGTGCTGCTAAAGAAAAAGATTTGTTGCCTTCTCCTGCTGGGCCTGTTCCTTCAAAAGATCCAAAAACAGAGCATGGCTCTCGGAAGAGGACTATTAGTCAGTCTTCTTCCTTAAAGTCAAGTAATAATAGCAACAAGGAAAATAGCGGCAGCAGCAAAAACAGTTCCTCCACGTCAAAGCAGAAGAGGACTGAAGGGAAGACTTCCAGTAGCTCTAAGGAGGTCAAGGAAAAGGCTCCAAATAGCTCTTCTAACTGTCCTCCATCTACACCAACTCCTGATGCTGCTAAGCCTCGGAGAACGAAGCTTGCCTTTGACGACAGAAATTATTCAGCAGACCATTATTTACAAGAAGCAAAAAAGCTAAAGCACAATGCAGATGCATTGTCTGATAGGTTTGAGAAAGCTGTATACTATCTTGATGCTGTGGTATCTTTCATTGAATGTGGGAATGCATTAGAGAAAAATGCTCAGGAATCCAAATCCCCATTCCTTATGTATTCAGAGACGGTGGAGCTCATCAAATACACCATGAAGCTAAAGAATTACTTGGCACCAGATGCTACAGCTGCAGATAAAAGACTCACAGTACTTTGCCTGCGATGCCAGTCTTTGCTGTACCTGAGGCTATTCAAACTGAAGAAAGAAACTGCTCTGAAGTATTCAAAGACACTAACAGAGCACCTGAAGAATTCTTATAATAATTCTCAAGCACCATCACCAGGCTTGGGAAGCAAAGCTGCTGGGATGCCTTCCCCTGTTTCTCCAAAGCTGTCACCAGGCAATTCGGGAAATTATTCTTCTGGGGCCAGTAGTGCTTCAGCAAGTGGTTCTTCAGTGACCATTCCACAGAGGATCCACCACATGGCAGCCAGCTATGTTCAGGTTACATCCAACTTCCTCTATGCCACCGAAATTTGGGACCAAGCTGAACAGCTTTCCAAAGAGCAAAAAGAATTCTTTGCTGAACTGGATAAAGTAATGGGTCCTCTCATCTTTAACGCAAGCATCATGACAGACCTAGTTCGTTATACCCGGCAGGGACTGCACTGGCTTCGCCAGGATGCCAAGTTGATATCCTGA

Related Sequences

bmy_17666T0 Protein

Length: 1126 aa      View alignments
>bmy_17666T0
MNREDRNVLRMKERERRNQEIQQGDDAFPPSSPLFAEPYKVTSKEDKLSSRIQSMLGNYDEMKDFIGDRSIPKLVAIPKPTVPPTADEKSNPNFFEQRHGSSHQSSKWTPVGPAPSTSQSQKRSSGLQSGHSSQRASAGASSGANSSGQRHDRDSYSSGGSSSRKKGQHGSEHSKSRSSSPGKPQAVSSLSSSHSRSHGNDHHSKEHQRSKSPRDPDANWDSPSRVPFSSGQHSNQSFPPSLMSKSSSMLQKPTAYVRPMDGQESMEPKLSSEHYSSQSHGNSMTELKPSSKAHLTKLKIPSQPLDESQQSNFGPGEQICVYAIREKLEITEVSIRVCGSMLKDDLKLSSSEDSDGEQDCDKTMPRSTPGSNSEPSHHNSEGADNSRDDSSSHSGSESSSGSDSESESSSSDSEANEPSQSASPEPEPPPTNKWQLDNWLNKVNPHKVSPASSVDSNIPSSQGYKKEGREQGTGNSYTDAGGPKETSSATPGRDSKTVQKGSESGRGRQKSPAQSDSTAQRRTVGKKQPKKTEKAAAEEPRGGLKIESETPVDMATSMPSSRHKAATKGSRKPNIKKESKSSPRPSAEKKKYKSTSKSSQKSREIIETDTSSSDSDESESLPPSSQTPKYPESNRTPVKPSSVEEEDSFFRQRMFSPMEEKELLSPLSEPDDRYPLIVKIDLNLLTRIPGKPYKETETPKGEKKNVPEKHTREAQKQASEKVSNKGKRKHKNEDDNRANESKKPKTEDKNSAGHKPSSNKESSKQSAAKEKDLLPSPAGPVPSKDPKTEHGSRKRTISQSSSLKSSNNSNKENSGSSKNSSSTSKQKRTEGKTSSSSKEVKEKAPNSSSNCPPSTPTPDAAKPRRTKLAFDDRNYSADHYLQEAKKLKHNADALSDRFEKAVYYLDAVVSFIECGNALEKNAQESKSPFLMYSETVELIKYTMKLKNYLAPDATAADKRLTVLCLRCQSLLYLRLFKLKKETALKYSKTLTEHLKNSYNNSQAPSPGLGSKAAGMPSPVSPKLSPGNSGNYSSGASSASASGSSVTIPQRIHHMAASYVQVTSNFLYATEIWDQAEQLSKEQKEFFAELDKVMGPLIFNASIMTDLVRYTRQGLHWLRQDAKLIS*