Part of scaffold_1561 (Scaffold)

For more information consult the page for scaffold_1561 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HSPA4 ENSTTRG00000004602 (Bottlenosed dolphin)

Gene Details

heat shock 70kDa protein 4

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004347, Bottlenosed dolphin)

Protein Percentage 97.08%
cDNA percentage 97.76%
Ka/Ks Ratio 0.34887 (Ka = 0.0161, Ks = 0.0462)

BT.64806 ENSBTAG00000015683 (Cow)

Gene Details

heat shock 70 kDa protein 4

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000020825, Cow)

Protein Percentage 96.06%
cDNA percentage 95.89%
Ka/Ks Ratio 0.1816 (Ka = 0.0208, Ks = 0.1145)

HSPA4  (Minke Whale)

Gene Details

heat shock 70kDa protein 4

External Links

Gene match (Identifier: BACU018922, Minke Whale)

Protein Percentage 97.59%
cDNA percentage 98.31%
Ka/Ks Ratio 0.44552 (Ka = 0.0137, Ks = 0.0307)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2382 bp    Location:422403..465764   Strand:+
>bmy_17668
ATGTCGGTGGTGGGCATAGATCTGGGGTTCCAGAGCTGCTACGTCGCTGTAGCCCGCGCCGGCGGCATCGAAACGATCGCTAATGAATACAGCGACCGCTGCACGCCTAGTGATTATGGAAGAATGGATTTATATCTCAGAGACATCCTTCAGAGTCAATTTCAAGATGTGAAATTGGTAATTTCCAATGCAAAGAACACAGTCCAAGGATTTAAAAGATTCCATGGCCGAGCATTCTCTGATCCATTTGTGGAGGCAGAAAAATCTAAACTTGCATATGATATTGTGCAGTTGCCCACTGGGTTAACAGGTATAAAGGTGAAATACATGGAGGAAGAGCGAAATTTTACCACGGAGCAAGTGACTGCCATGCTTTTGTCCAAACTGAAGGAGACAGCAGAAAGTGTTCTTAAGAAGCCTGTCGTGGACTGTGTTGTTTCGATTGCTGGTCTCAATTGCCTTCGATTAATGAATGAAACTACTGCAGTTGCTCTTGCATATGGAATCTATAAACAAGATCTTCCTGCCTTAGAAGAGAAACCAAGAAATGTAGTTTTTGTAGACATGGGGCATTCTTCTTATCAAGTTTCTGTATGTGCGTTTAATAGAGGAAAACTTAAAGTTCTGGCCACTGCATTTGACACAACACTGGGAGGCAGAAAATTTGATGAGGTGCTAGTAAATCACTTCTGTGAGGAATTTGGGAAGAAATACAAGCTAGACATAAAGTCCAAAATCCGTGCATTATTACGACTGTCTCAGGAGTGTGAGAAACTCAAGAAATTGATGAGTGCAAATGCTTCAGACCTTCCTTTGAGCATCGAATGTTTTATGAATGATGTTGATTTAAAGAAAGAAGATATTTATGCAGTGGAGATAGTTGGTGGTGCAACACGAATCCCTGCAGTGAAAGAGAAGATCAGCAAATTTTTTGGTAAAGAACTTAGTACAACACTAAATGCCGATGAAGCTGTTACTAGAGGCTGTGCATTGCAGTGTGCAATCTTATCGCCTGCTTTCAAAGTCAGAGAATTTTCTATCACTGATGTAGTACCATATCCAATATCTCTGAGATGGAATTCTCCAGCTGAAGAAGGGTCAAGTGACTGTGAAGTCTTTTCAAAAAATCATGCTGCTCCTTTCTCTAAAGTACTCACATTTTATAGAAAGGAACCTTTCACTCTTGAGGCCTATTATAGCTCTCCTCAGGATTTACCCTATCCAGATCCTGCTATAGCTCAGTTTTCAGTTCAGAAAGTCACCCCTCAGTCTGATGGCTCCAGTTCAAAAGTGAAAGTCAAGGTTCGAGTAAATGTCCATGGCATTTTCAGTGTGTCCAGTGCATCTCTAGTGGAAGTGCACAAGTTTGAAGAAAATGAGGAACCGATGGAAACAGATCAGAATGCAAAGGAGGAAGAGAAGATGCAAGTGGATCAGGAGGAACCACATGTTGAAGAGCAACAGCAGCAGACACCAGCAGAAAATAAGGCAGAGTCTGAAGAAATGGAGACTTCTCAAGCTGGATCAAAAGACAAAAAGATGGACCAGCCCCCTCAAGCCAAGAAGGCAAAAGTGAAGACCAGTACTGTGGACCTGCCAATTGAGAATCAGCTGTTATGGCAGATAGACAGAGAGATGCTCAACTTGTACATTGAAAATGAGGGTAAGATGATCATGCAGGATAAACTAGAGAAGGAGAGGAATGATGCTAAGAATGCAGTAGAAGAATACGTGTACGAAATGAGAGACAAGCTTAGTGGTGAATATGAGAAGTTTGTGAGTGAAGATGACCGTAACAGTTTTACCTTAAAACTAGAAGATACTGAAAATTGGTTATATGAGGATGGAGAAGACCAGCCAAAGCAAGTTTATGTTGATAAATTGGCTGAATTAAAAAATCTAGGTCAGCCTATTAAGATACGATTCCAGGAATCTGAAGAAAGACCAAAATTATTTGACGAACTAGGGAAACAAATCCAACAGTATATGAAAGTAATCAGCTCTTTCAAAAACAAGGAGGACCAGTATGACCATTTGGATGCTGTTGACTTGGTGAGGGTACAGAAAAGCACGAATGAGGCCATGGAGTGGATGAATAACAAGCTGAATCTGCAGAACAAGCAGAGTCTGACCGTGGATCCAGTTGTCAAGGCAAAAGAGATTGAAGCTAAAATTAAAGAGCTGACGAGTATCTGTAGCCCTATAATTTCAAAGCCAAAACCCAAAGTGGAACCTCCAAAAGAGGAGCAAAAAAATGCAGAGCAGAATGGACCAGTGGATGGACAAGGAGACAGCCCAGGCCCTCAGGCTGCTGAGCAGGGTACAGACACAGCTCTGCCTTCGGATTCAGACAAGAAGCTTCCTGAAATGGACATTGATTGA

Related Sequences

bmy_17668T0 Protein

Length: 794 aa      View alignments
>bmy_17668T0
MSVVGIDLGFQSCYVAVARAGGIETIANEYSDRCTPSDYGRMDLYLRDILQSQFQDVKLVISNAKNTVQGFKRFHGRAFSDPFVEAEKSKLAYDIVQLPTGLTGIKVKYMEEERNFTTEQVTAMLLSKLKETAESVLKKPVVDCVVSIAGLNCLRLMNETTAVALAYGIYKQDLPALEEKPRNVVFVDMGHSSYQVSVCAFNRGKLKVLATAFDTTLGGRKFDEVLVNHFCEEFGKKYKLDIKSKIRALLRLSQECEKLKKLMSANASDLPLSIECFMNDVDLKKEDIYAVEIVGGATRIPAVKEKISKFFGKELSTTLNADEAVTRGCALQCAILSPAFKVREFSITDVVPYPISLRWNSPAEEGSSDCEVFSKNHAAPFSKVLTFYRKEPFTLEAYYSSPQDLPYPDPAIAQFSVQKVTPQSDGSSSKVKVKVRVNVHGIFSVSSASLVEVHKFEENEEPMETDQNAKEEEKMQVDQEEPHVEEQQQQTPAENKAESEEMETSQAGSKDKKMDQPPQAKKAKVKTSTVDLPIENQLLWQIDREMLNLYIENEGKMIMQDKLEKERNDAKNAVEEYVYEMRDKLSGEYEKFVSEDDRNSFTLKLEDTENWLYEDGEDQPKQVYVDKLAELKNLGQPIKIRFQESEERPKLFDELGKQIQQYMKVISSFKNKEDQYDHLDAVDLVRVQKSTNEAMEWMNNKLNLQNKQSLTVDPVVKAKEIEAKIKELTSICSPIISKPKPKVEPPKEEQKNAEQNGPVDGQGDSPGPQAAEQGTDTALPSDSDKKLPEMDID*