Part of scaffold_1552 (Scaffold)

For more information consult the page for scaffold_1552 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CPT1A ENSTTRG00000016819 (Bottlenosed dolphin)

Gene Details

carnitine palmitoyltransferase 1A (liver)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015947, Bottlenosed dolphin)

Protein Percentage 72.8%
cDNA percentage 72.63%
Ka/Ks Ratio 0.16364 (Ka = 0.0256, Ks = 0.1567)

CPT1A ENSBTAG00000021999 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000029336, Cow)

Protein Percentage 91.69%
cDNA percentage 89.76%
Ka/Ks Ratio 0.09095 (Ka = 0.0433, Ks = 0.4762)

CPT1A  (Minke Whale)

Gene Details

carnitine palmitoyltransferase 1A (liver)

External Links

Gene match (Identifier: BACU003562, Minke Whale)

Protein Percentage 98.15%
cDNA percentage 97.84%
Ka/Ks Ratio 0.19008 (Ka = 0.0124, Ks = 0.0655)

Genome Location

Sequence Coding sequence

Length: 1299 bp    Location:27596..176   Strand:-
>bmy_17673
ATGGCGGAGGCTCACCAAGCCGTGGCCTTTCAGTTCACGGTCACTCCCGACGGAATCGACCTCCGGCTGAGCCACGAGGCCCTCAGGCAGATCTATCTGTCTGGACTTCATTCCTGGAAGAAGAAGTTCATCAGATTCAAGAATGGCATCATCACCGGCGTGTACCCGGCGAGTCCCTCCAGCTGGCTCATCGTGGTTGTGGGCGTGGTATCAACAATGTACACCAAGATCGACCCCTCTTTGGGAATAATTGCAAAAATCAATCGGACCCTTGACAGGACTGGCTGCATGTCCAGCCAGACGAAGAAGGTGGTCAGCGGCGTCCTCTTCGGCACGGGCCTGTGGGTGGCCCTCATCATCACCATGCGCTACTCCCTGAAGGGTATGGTCAAGATCTTTTCAGGCCGCAAACCCATGTTGTACAGCTTCCAGACGTCTCTGCCACGCCTGCCGGTCCCAGCCGTCCAAGATACCGTCAACAGGTACCTGGAATCCGTGAAGCCTCTTATGAAGGAAGGAGACTTTACACGGATGACAGCTCTGGCACAAGATTTTGCTATCAATCTCGGGCCGAGATTGCAGTGGTATTTGAAGCTAAAATCCTGGTGGGCTACCAATTATGTGAGTGACTGGTGGGAGGAGTACATCTACCTCCGAGGACGAGGGCCGCTGATGGTGAACAGCAATTACTACGCGATGCACCTCAGGGACAGCAGGCACATCGTCGTGTTCCACAAGGGCCGCTACTTCAAGGTCTGGCTCTACCACGACGGCCGGCTGTTGAAGCCCCGGGAGATCGAGCAACAGATGCAGAGGATCCTGGATGACCCGTCGGAGCCCCAGGCTGGGGAGGCGAAGCTGGCGGCCCTCACGGCGGGAGACAGTCACATAAACATTTTTGTTTCGTGTAGGTGGTTTGATAAATCGATCACATTTGTCATCTTCAAAAACGGCAAGATGGGCATAAACGCGGAGCACTCCTGGGCTGACGCCCCCATCATCGGTCACCTTTGGGAGTACGTCCTGGCCACGGACAGCTTCCAGCTGGGTTATGCAGAGGATGGACACTGTAAAGGGGACACCAACCCAAACATCCCATACCCGACCCGGCTACAGTGGGACATCCCGCAGGAATGTCAGGAAGTCATAGAGACTTCCCTGAGCAGCGCGAACCTCCTGGCCAGCGACGTGGATTTCTGTTCTTTTCTGTTCAGTGCTTTCGGTAAAGGGCTGATCAAGAAATGCAGAACCAGCCCGGACGCCTTTGTGCAGCTCTCCCTCCAGCTGGCTCATTACAAG

Related Sequences

bmy_17673T0 Protein

Length: 433 aa      View alignments
>bmy_17673T0
MAEAHQAVAFQFTVTPDGIDLRLSHEALRQIYLSGLHSWKKKFIRFKNGIITGVYPASPSSWLIVVVGVVSTMYTKIDPSLGIIAKINRTLDRTGCMSSQTKKVVSGVLFGTGLWVALIITMRYSLKGMVKIFSGRKPMLYSFQTSLPRLPVPAVQDTVNRYLESVKPLMKEGDFTRMTALAQDFAINLGPRLQWYLKLKSWWATNYVSDWWEEYIYLRGRGPLMVNSNYYAMHLRDSRHIVVFHKGRYFKVWLYHDGRLLKPREIEQQMQRILDDPSEPQAGEAKLAALTAGDSHINIFVSCRWFDKSITFVIFKNGKMGINAEHSWADAPIIGHLWEYVLATDSFQLGYAEDGHCKGDTNPNIPYPTRLQWDIPQECQEVIETSLSSANLLASDVDFCSFLFSAFGKGLIKKCRTSPDAFVQLSLQLAHYK