Part of scaffold_1583 (Scaffold)

For more information consult the page for scaffold_1583 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CPSF3 ENSTTRG00000000861 (Bottlenosed dolphin)

Gene Details

cleavage and polyadenylation specific factor 3, 73kDa

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000813, Bottlenosed dolphin)

Protein Percentage 72.58%
cDNA percentage 71.92%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0402)

CPSF3 ENSBTAG00000019735 (Cow)

Gene Details

Cleavage and polyadenylation specificity factor subunit 3

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000026303, Cow)

Protein Percentage 100.0%
cDNA percentage 95.26%
Ka/Ks Ratio 0.001 (Ka = 0.0002, Ks = 0.2099)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1986 bp    Location:258852..215542   Strand:-
>bmy_17690
ATGTCTGCGATTCCCGCAGAGGAGAGTGACCAGCTGCTGATCCGACCCCTTGGAGCTGGGCAAGAAGTGGGAAGATCATGTATTATTCTGGAGTTCAAAGGAAGAAAAATAATGTTGGACTGTGGGATCCACCCAGGCCTAGAAGGAATGGATGCTCTTCCTTACATCGATTTAATTGACCCAGCTGAGATTGATCTCCTACTAATTAGTCATTTCCATTTGGATCACTGTGGAGCTTTGCCCTGGTTTCTACAGAAGACAAGTTTCAAAGGAAGAACATTTATGACTCATGCCACAAAAGCTATTTATAGATGGCTTCTTTCAGATTATGTCAAAGTTAGTAATATATCAGCAGACGACATGCTGTATACTGAGACAGATTTGGAAGAGAGCATGGACAAAATTGAAACCATCAACTTTCATGAAGTGAAGGAAGTTGCAGGAATCAAGTTTTGGTGTTACCACGCAGGCCATGTCCTGGGAGCTGCCATGTTCATGATTGAGATCGCGGGCGTGAAGCTTTTGTACACAGGTGATTTCTCAAGACAAGAAGATAGACACTTAATGGCAGCTGAAATTCCTAATATTAAACCTGATATTCTTATCATTGAATCTACTTACGGAACCCATATCCATGAGAAGCGAGAAGAGCGAGAGGCAAGGTTCTGTAACACTGTTCACGATATTGTGAACCGAGGGGGCAGAGGTCTCATTCCTGTCTTTGCTCTTGGAAGGGCTCAGGAGCTTCTCTTGATTTTAGATGAGTACTGGCAGAATCACCCAGAACTCCATGATATTCCAATATACTATGCATCGTCTTTGGCCAAGAAGTGTATGGCAGTGTACCAGACATATGTAAACGCCATGAATGACAAAATCCGCAAACAGATCAACATCAACAATCCCTTTGTTTTCAAACATATTAGTAACCTTAAGAGCATGGATCATTTTGATGACATTGGTCCCAGCGTTGTAATGGCCTCCCCAGGCATGATGCAGAGTGGCTTATCCAGAGAGCTCTTTGAAAGCTGGTGTACTGATAAGAGGAATGGCGTCATTATAGCGGGATACTGTGTAGAAGGGACACTTGCCAAGCATATCATGTCTGAACCTGAAGAAATCACTACCATGTCCGGGCAGAAGCTACCACTGAAAATGTCTGTTGATTACATTTCTTTCTCTGCTCACACAGATTACCAGCAAACCAGCGAATTTATTCGTGCTTTGAAACCGCCTCATGTGATTTTAGTCCATGGAGAACAAAACGAAATGGCCAGATTGAAAGCAGCCCTGATTCGAGAATATGAAGATAATGATGAAGTTCACATAGAGGTTCATAATCCTCGGAATACAGAAGCAGTGACCTTGAACTTCAGGGGAGAAAAACTAGCCAAGGTCATGGGCTTTTTAGCAGACAAAAAACCAGAACAAGGCCAGCGGGTCTCAGGAATACTTGTTAAAAGAAACTTTAATTATCACATACTTTCTCCTTGTGACCTCTCTAATTATACTGACTTGGCCATGAGCACTGTAAAGCAGACCCAAGCCATTCCATATACTGGTCCTTTTAATTTGCTTTATTACCAGCTACAGAAATTGACAGGTGAACCAGGAATGGTGGTATTAGAATGGCTGGCAAACCCTTCCAATGATATGTATGCAGATACAGTAACAACCGTGATATTAGAAGTCCAGTCAAACCCGAAAATAAGGAAAGGTGCAGTACAGAAGGTTTCTAAAAAATTAGAAATGCACGTTTATAGCAAGAGGTTGGAGATCATGCTCCAGGACATATTTGGAGAAGACTGTGTTAGTGTAAAAGATGGTTCTATTCTTAGTGTCACAGTGGACGGAAAAACTGCTAACATAAACTTGGAGACACGGACTGTAGAATGTGAAGAAGGAAGTGAAGATGACGAATCCCTACGAGAAATGGTGGAACTGGCAGCCCAGAGACTATATGAGGCCCTCACGCCAGTTCACTAA

Related Sequences

bmy_17690T0 Protein

Length: 662 aa      View alignments
>bmy_17690T0
MSAIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDFSRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRNFNYHILSPCDLSNYTDLAMSTVKQTQAIPYTGPFNLLYYQLQKLTGEPGMVVLEWLANPSNDMYADTVTTVILEVQSNPKIRKGAVQKVSKKLEMHVYSKRLEIMLQDIFGEDCVSVKDGSILSVTVDGKTANINLETRTVECEEGSEDDESLREMVELAAQRLYEALTPVH*