Part of scaffold_1545 (Scaffold)

For more information consult the page for scaffold_1545 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

IL1R1 ENSTTRG00000005912 (Bottlenosed dolphin)

Gene Details

interleukin 1 receptor, type I

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005591, Bottlenosed dolphin)

Protein Percentage 87.09%
cDNA percentage 87.98%
Ka/Ks Ratio 0.26764 (Ka = 0.0145, Ks = 0.0542)

IL1R1 ENSBTAG00000005273 (Cow)

Gene Details

interleukin-1 receptor type 1 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000006938, Cow)

Protein Percentage 82.92%
cDNA percentage 86.76%
Ka/Ks Ratio 0.35132 (Ka = 0.1027, Ks = 0.2922)

IL1R1  (Minke Whale)

Gene Details

interleukin 1 receptor, type I

External Links

Gene match (Identifier: BACU017676, Minke Whale)

Protein Percentage 88.11%
cDNA percentage 89.65%
Ka/Ks Ratio 0.64809 (Ka = 0.0486, Ks = 0.0751)

Genome Location

Sequence Coding sequence

Length: 1467 bp    Location:465930..494445   Strand:+
>bmy_17709
ATGAAAGTATTATTCAGGCTTGTTTGTTTCATAGCTCTACTGACTTCTTCTCTGGAGGCTGATAAATGTGAGGAACGTGAAGAGGAAGTTATTTTAGTTTCGTCTGCACGTGAAATTGATGCTCGTTCATGTCCTCTTATCCTAAGTGAACACAAAGGCCCTATAATTTGGTATAAAAATGACGGCAAGACACCTGTATCTACGGAAAGAGACTCCAGGATTCATCAGCACAAAGATAAACTTTGGTTTGTTCCTGCTGAAGTAGAGGATTCAGGATATTACTACTGTGCAGTGAGCAATTCAACTTACTGCCTCAAAACTAAAATAGCTGCAGAGTTTGTACAGCATGAGCCTAACTTGTGTTACAATTCACAAGCCGTATTTACACAGAGACTACTGATTCCAGGAGATGGACAACTTGTATGTCCTTATTTGGATTTTTTCAAAGATGAAAACAATGAGTTACCCCAAATACAGTGGTATAAGGATTGCAAACCTCTACTTCTTGACAATATAAACTTTGTTGGAATAACAAATAAACTCATCATCACGAATGTGACTACGGCGCATAATGGGCACTATACCGTGCAGAATCCTTTAAACAAAAGGAGGAGTACAGTCATCGCACGGCTTAATATTACAGCAGTGGAAAGTAAATTTTTTCTACATCCATTTATCTGTTTAGCCAAGAATACAGAAGGAAGGAGTACAGCATATATCCAATTAATACATCCAGCCCCTGATTTCCAGACGCCCACAATTGGTGTATTTGTCATGTTAACATTGGTAATTACATGCTCTGTTTTCATCTATAAAGTCTTCAAGGTTGACATTGTGCTTTGGTACAGAGATTCTTTCTATGATTTTCTCCCAAAAAAAGCTTCAGATGGAAAGACGTATGATGCATACATACTATGTCCAAAGACCCCTGGAGAAGGGTCCACCTCTAACTCAGATATTTTTGTGTTTAACGTCTTACCTGAGGTCTTGGAAAAACAGTGTGGATATAAGCTGTTCATCAGTGGCCGAGATGACTACGTTGGGGAAAGCATTGTTGAGGTTGCTAATGAAACCATAAAGAAAAGCAGAAGACTGATCATCATTTTGGCCCGAGAAATATCAGGATTCCGCTGGCTGGGGAATTCATCTGAAGACCAGATAGCCATGTACAACGCTCTCATTCAGGAAGGAATTAAAGTTGTCCTGCTGGAGCTAGAGAAAATCCCAGACTATGAGAAAATGCCAGAATCCATTAAATTCATTAAGCAGAAACAGGGGGCCATACGSTGGTCAGGGGACATTAGAGAAGGGTCGCAGTCTACGAACTCGAGGTTCTGGAAGAAGGTCAGGTACCACATGCCAGCCCAGCGGCAGCCGCCTTCAGCCAAGCACAAGCTGCTGTCCCCGGCCACTCAGCTGGACTGTAAGGAGAAACGGCCACTAGAGGTCCACGTGCCCCTCGGGTAG

Related Sequences

bmy_17709T0 Protein

Length: 489 aa      View alignments
>bmy_17709T0
MKVLFRLVCFIALLTSSLEADKCEEREEEVILVSSAREIDARSCPLILSEHKGPIIWYKNDGKTPVSTERDSRIHQHKDKLWFVPAEVEDSGYYYCAVSNSTYCLKTKIAAEFVQHEPNLCYNSQAVFTQRLLIPGDGQLVCPYLDFFKDENNELPQIQWYKDCKPLLLDNINFVGITNKLIITNVTTAHNGHYTVQNPLNKRRSTVIARLNITAVESKFFLHPFICLAKNTEGRSTAYIQLIHPAPDFQTPTIGVFVMLTLVITCSVFIYKVFKVDIVLWYRDSFYDFLPKKASDGKTYDAYILCPKTPGEGSTSNSDIFVFNVLPEVLEKQCGYKLFISGRDDYVGESIVEVANETIKKSRRLIIILAREISGFRWLGNSSEDQIAMYNALIQEGIKVVLLELEKIPDYEKMPESIKFIKQKQGAIRWSGDIREGSQSTNSRFWKKVRYHMPAQRQPPSAKHKLLSPATQLDCKEKRPLEVHVPLG*