Part of scaffold_1578 (Scaffold)

For more information consult the page for scaffold_1578 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SFTPD ENSTTRG00000003009 (Bottlenosed dolphin)

Gene Details

surfactant protein D

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002823, Bottlenosed dolphin)

Protein Percentage 87.77%
cDNA percentage 94.29%
Ka/Ks Ratio 1.70147 (Ka = 0.0685, Ks = 0.0403)

SFTPD ENSBTAG00000046421 (Cow)

Gene Details

Pulmonary surfactant-associated protein D

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000008579, Cow)

Protein Percentage 81.85%
cDNA percentage 88.1%
Ka/Ks Ratio 0.60816 (Ka = 0.1089, Ks = 0.179)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 996 bp    Location:37815..48258   Strand:+
>bmy_17710
ATGCTTCTCCTCCCTCTCTCCGTGCTGACCCTGCTCTCACAGCCCCCAAGGTCTCTGGGGGCAGAAGTGAAGACCTATTCCCAGAAAACACTGGCCAACGCCTGCACGCTGGTCGTGTGTAGCACCCCAGAGAATGGCCTGCCTGGTCGTGATGGACAAGATGGGAGAGAAGGCCCCCAGGGCGAGAAGGGGGATCCAGGTTTACCAGGACCTGTAGGAGGACCAGGGATGCCTGGACCAGCTGGCCCAGTTGGGCCCAAAGGGGACAATGGCTCTGCTGGAGAACCCGGGCCAAAGGGAGACACTGGACCACCTGGGCCTCCAGGACCTCGAGGTATGCCTGGTCCAGCTGGAACAGAAGGTCCCTCAGGGAGGCAGGGGAACATAGGACCTGCAGGTGCACCAGGCCCCAAAGGCGAGACTGGACCCAGTGGAGAAGTGGGTGCCACAGGCATGCAGGGCTCCCCAGGGACAAGAGGCCCCGCAGGTCTTAAAGGAGAGAGAGGTGCCCCCGGTGAACGCGGAGCCGCTGGAAGTGCTGGGGCAGCAGGGCCTTCTGGAGCCATGGGTCCACAGGGACCTGCAGGTGCCAGGGGCCCCCCAGGACTGAAGGGGGACAGAGGTGCTCCTGGAGAAAGAGGAGCAAAGGGAGAGAGTGGACTCCCAGACATCACTGCTCTCCGGCAGCAGGTGGAGACCTTACAGGGACAGCTACAACGCCTCCAGAATGYTTTCTCTCAGTATAAGAAAGCCGAGAACGAGGCCTTGAGACAGCTGGTCACAGACCAGAACAAGGCTGCTTTCCTGAGCATGACCGACGACAAGAAGGAAGGCAGTTTCACCTACCCCACAGGGGAGCCCCTGGTGTATTCGAACTGGGCCCCCGGGGAGCCCAACAACGACAGAGGCGCAGAGAACTGTGTGGAGATCTATCCCAATGGCAAGTGGAACGACAAGCCCTGCGGAGAACAGCTCCTCGTGATCTGCGAGTTCTGA

Related Sequences

bmy_17710T0 Protein

Length: 332 aa     
>bmy_17710T0
MLLLPLSVLTLLSQPPRSLGAEVKTYSQKTLANACTLVVCSTPENGLPGRDGQDGREGPQGEKGDPGLPGPVGGPGMPGPAGPVGPKGDNGSAGEPGPKGDTGPPGPPGPRGMPGPAGTEGPSGRQGNIGPAGAPGPKGETGPSGEVGATGMQGSPGTRGPAGLKGERGAPGERGAAGSAGAAGPSGAMGPQGPAGARGPPGLKGDRGAPGERGAKGESGLPDITALRQQVETLQGQLQRLQNXFSQYKKAENEALRQLVTDQNKAAFLSMTDDKKEGSFTYPTGEPLVYSNWAPGEPNNDRGAENCVEIYPNGKWNDKPCGEQLLVICEF*