Part of scaffold_1578 (Scaffold)

For more information consult the page for scaffold_1578 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

FAM213A ENSTTRG00000016396 (Bottlenosed dolphin)

Gene Details

family with sequence similarity 213, member A

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015540, Bottlenosed dolphin)

Protein Percentage 83.33%
cDNA percentage 87.28%
Ka/Ks Ratio 0.8005 (Ka = 0.1345, Ks = 0.168)

FAM213A ENSBTAG00000021416 (Cow)

Gene Details

Redox-regulatory protein FAM213A

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000028551, Cow)

Protein Percentage 74.65%
cDNA percentage 81.11%
Ka/Ks Ratio 0.53045 (Ka = 0.1874, Ks = 0.3533)

FAM213A  (Minke Whale)

Gene Details

family with sequence similarity 213, member A

External Links

Gene match (Identifier: BACU007199, Minke Whale)

Protein Percentage 83.33%
cDNA percentage 87.28%
Ka/Ks Ratio 1.02314 (Ka = 0.143, Ks = 0.1398)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 687 bp    Location:213626..250228   Strand:+
>bmy_17715
ATGTCTTTCCTCCAGGATCCAAGTTTCTTCACCATGGGAATGTGGTCCATTGGTGCGGGGGCCATAGGGGCTGCTGCCTTGGCACTGATCCTGGCCAACACAGACGTATTTCTGCCCAAGCCCCAGAAAGCAACGCTGGAGTATCTGGAGGATATAGACCTGAAAACACTGGAGAAGGAACCAATGACTTTTAAAGCAAAGGCGCTCTGGGAAAATAATGGAGCTGTGATTATGGCTGTGCGGAGGCCAGGCTGTTTCCTCTGTCGAGAGGAGGCTGCAGACCTGTCCTCCCTGAAGCCCAAGTTGGACGAGCTGGGCATCCCCCTGTACGCAGTGGTAAAGGAGCAGGTCAAGACTGAAGTGAAGGACTTCCAGCCTTATTTCAAAGGCGAAATCTTCCTGGATGAAAAGAAGAAGTTCTATGGTCCCGAAAGGCGCAAGATGATGTTCATGGGATTTGTCCGTCTGGGCGTCTGGTACAACTTCTTCCGGGCCCGGAGCGGAGGCTTTTCCGGAAACTTGGAAGGCGAGGGCTTCATCCTTGGGGGAATTTTTGTGGTGGGACCAGGAAAGCAGGGCTCCCTGATCTTTTCAAGAAAGGCAACATCAATTCAAAACAGCTCGGAAAGGTCTACCAAAGACGTTAGCACCTGGCTCAGCCAAGTCCTGCCATACTTCATGGGGTGA

Related Sequences

bmy_17715T0 Protein

Length: 229 aa      View alignments
>bmy_17715T0
MSFLQDPSFFTMGMWSIGAGAIGAAALALILANTDVFLPKPQKATLEYLEDIDLKTLEKEPMTFKAKALWENNGAVIMAVRRPGCFLCREEAADLSSLKPKLDELGIPLYAVVKEQVKTEVKDFQPYFKGEIFLDEKKKFYGPERRKMMFMGFVRLGVWYNFFRARSGGFSGNLEGEGFILGGIFVVGPGKQGSLIFSRKATSIQNSSERSTKDVSTWLSQVLPYFMG*