Sequence detailsbmy_17740 (Coding sequence)

Part of scaffold_1567 (SequenceType object (1))

For more information consult the page for scaffold_1567 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HACL1ENSTTRG00000014407 (Bottlenosed dolphin)

Gene Details

2-hydroxyacyl-CoA lyase 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000013661, Bottlenosed dolphin)

Protein Percentage 14.19%
cDNA percentage 30.57%
Ka/Ks Ratio 0.15034 (Ka = 1.6535, Ks = 10.9979)

BT.23353ENSBTAG00000003718 (Cow)

Gene Details

2-hydroxyacyl-CoA lyase 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000004843, Cow)

Protein Percentage 13.99%
cDNA percentage 31.32%
Ka/Ks Ratio 0.20361 (Ka = 1.724, Ks = 8.4669)

Additional orthologs identified in other species via the OPTIC pipeline.

COLQ (Human)   Colq (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2022 bp    Location:1227..110506   Strand:+
Raw sequence 
>bmy_17740
ATGAATTATTACACAGTATTCTACCACATTCAAGAACAACTGCCCAGAGACTGTTTTGTGGTGAGCGAAGGAGCGAATACTATGGATATTGGGCGCACTGTGCTTCAAAACTACCTTCCTCGTCACAGGCTTGATGCTGGTACTTTTGGAACAATGGGAGTCGGTTTGGGATTTGCCATTGCATCTGCTCTAGTGGCTAAAGATAGAAACCCAGGGCAGCGGGTCATCTGTGTGGAAGGAGACAGTGCATTTGGATTTTCTGGCATGGAAGTGGAAACCATCTGCAGGTACAACTTGCCAATCATACTTTTGGTGGTGAATAACAATGGAATTTACCAAGGTTTTGATACAGATACTTGGAAGGAAATGTTAAAATTTGGAGATGCTACTATAGTGGCCCCTCCAATGTGTCTTCTGCCACACTCACATTACGAGCATGTCATGATTGCATTTGGAGGCAAAGGGTATTTTGTACAAACACCAGAAGAACTCCAGAAATCCCTGAGGCAGAGCCTGGCAGACACAACTAAACCCTCTCTTATCAACATCATGATTGAGCCGCAAGCCATGCGGAAAGCCCAGCTTTTCTTCCGCTTCATCGTGTCTCAGCCCACTTTCCTCACCAGCGTGCTTCCAATTTCAGCAGCCCTTCCCGGCCTGGATCAGAAGAAGCGTGGCGGCCACAGAGCATGCTGCCTGCTGACCCCCCCGCCACCCCCTCTGTTCCCACCACCGTTCTTTAGAGGGGGCCGAAGTCCGCTTCTCTCCCCAGACATGAAGAATCTCGTCCTGGAACTGGAGACCACACGGCCCCCATGCGTGCAAGGGTCGCTCAGCTCCCCCAGGCCTCCGGGGCCCCAGGTCGGTGCATCCCCCAGGCCCTACCCCACTGTCCTCTTTTCAGAGGAGGGATGCCCTCTGGGCAGAGCTGCCCCTTTTCAGGGCCCGCCTGGGCTTCCCGGCAAGACAGGACCAAAGGGAGAAAAGGGGGAGCTTGGCCGGCCGGGAAGGAAGGGCAGACCCGGCCCCCCAGGTGTTCCTGGCATGCCTGGGCCTGTTGGCTGGCCCGGCCCTGAAGGCCCCAGGGGTGAAAAAGGTGACCTGGGGATGATGGGCTTGCCAGGGTCAAGAGGACCAATGGGCTCCAAGGGCTACCCTGGATCCAGAGGGGAAAAGGGATCCAGAGGTGAAAGGGGTGACTTGGGTCCCAAAGGAGAAAAGGGTTTCCCAGGACTTCCTGGAATGTTGGGGCAGAAAGGTGAAATGGGACCAAAGGGCGAGCCCGGGATAGCAGGCCACCGGGGGCCCACAGGAAGACCGGGAAAACGAGGCAAGCAGGGGCAGAAGGGAGATAGTGGAGTTATGGGCCCACCAGGCAAACCTGGGCCTTCTGGTCAACCTGGCCGTCCAGGCGCCCCAGGCCCCCCGGGTCCCTCATCTGCAGTAACAGCAGTCTGTTGCTTCCTAGGACACCTTGTAATGGGACCCAAAGGGGAAAGAGGATTTCCCGGGCCTCCAGGAAGATGTCTTTGTGGCCCTCCCATGAATGTGAATAACCCTTCCTATGGGGAGTCTGCATATGGGCCCAGTTCCCCACGAGTTCCTGTGATATTTGTGGTCAACAACCAGGAGGAGCTTGAGAGATTGAACACCCAAAATGCCATTGCCTTCCGCAGAGACCAGAGGTCTCTGTACTTCAAGGACAGCCTTGGCTGGCTCCCCATCCAGCTGACGTCTTTCTACCCTGTGGACTACCCCGTAGACCACCGCGGCTCCTGCGGGGACGGGGTCCTGCAGCCGGGGGAGGAGTGTGATGACGGGAACGGCGATGTGGGTGACGACTGCATCCGCTGTCGCCGGGCCTACTGTGGAGATGGTCACCGGCACAGGGGCGTGGAGGACTGTGACGGCTCTGACTTCGGCCACCTGACCTGCGAGACCTATCTCCCCGGGTCGTACGGAGACCTGCGGTGCACCCCGTACTGCTACATCGACTCCACGCCCTGTCGCTACTTCACCTGA

Related Sequences

bmy_17740T0 SequenceType object (3)

Length: 674 aa      View alignments
>bmy_17740T0
MNYYTVFYHIQEQLPRDCFVVSEGANTMDIGRTVLQNYLPRHRLDAGTFGTMGVGLGFAIASALVAKDRNPGQRVICVEGDSAFGFSGMEVETICRYNLPIILLVVNNNGIYQGFDTDTWKEMLKFGDATIVAPPMCLLPHSHYEHVMIAFGGKGYFVQTPEELQKSLRQSLADTTKPSLINIMIEPQAMRKAQLFFRFIVSQPTFLTSVLPISAALPGLDQKKRGGHRACCLLTPPPPPLFPPPFFRGGRSPLLSPDMKNLVLELETTRPPCVQGSLSSPRPPGPQVGASPRPYPTVLFSEEGCPLGRAAPFQGPPGLPGKTGPKGEKGELGRPGRKGRPGPPGVPGMPGPVGWPGPEGPRGEKGDLGMMGLPGSRGPMGSKGYPGSRGEKGSRGERGDLGPKGEKGFPGLPGMLGQKGEMGPKGEPGIAGHRGPTGRPGKRGKQGQKGDSGVMGPPGKPGPSGQPGRPGAPGPPGPSSAVTAVCCFLGHLVMGPKGERGFPGPPGRCLCGPPMNVNNPSYGESAYGPSSPRVPVIFVVNNQEELERLNTQNAIAFRRDQRSLYFKDSLGWLPIQLTSFYPVDYPVDHRGSCGDGVLQPGEECDDGNGDVGDDCIRCRRAYCGDGHRHRGVEDCDGSDFGHLTCETYLPGSYGDLRCTPYCYIDSTPCRYFT*