Part of scaffold_1573 (Scaffold)

For more information consult the page for scaffold_1573 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LAMTOR3 ENSTTRG00000015015 (Bottlenosed dolphin)

Gene Details

late endosomal/lysosomal adaptor, MAPK and MTOR activator 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014232, Bottlenosed dolphin)

Protein Percentage 88.0%
cDNA percentage 90.0%
Ka/Ks Ratio 0.90417 (Ka = 0.1074, Ks = 0.1188)

LAMTOR3 ENSBTAG00000007923 (Cow)

Gene Details

Ragulator complex protein LAMTOR3

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000044998, Cow)

Protein Percentage 90.32%
cDNA percentage 89.78%
Ka/Ks Ratio 0.35567 (Ka = 0.0797, Ks = 0.224)

LAMTOR3  (Minke Whale)

Gene Details

late endosomal/lysosomal adaptor, MAPK and MTOR activator 3

External Links

Gene match (Identifier: BACU020275, Minke Whale)

Protein Percentage 72.63%
cDNA percentage 83.16%
Ka/Ks Ratio 0.9192 (Ka = 0.1947, Ks = 0.2118)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 462 bp    Location:285244..270430   Strand:-
>bmy_17752
ATGAAAAGTGATGAGTTGAGCTTTGTGATAGTGTGTGCAAAGGACCTAAAACGATTCCTGTACAAAAAATTACCAAGTGTTGAGGGGCTCCATGCTATTGTTGTGTCAGATAGAGATGGCGTGCCTGTCATTAAAGTGGCCAATGATAATGCTCCAGAGCACGCTTTGAGACCTGGTTTCTTGTCTACTTTTGCCCTTGCAACAGACCAAGGGAGCAAACTTGGACTTTCAAAAAATAAAAGTATCATCTGTTACTATAACACCTACCAGGTGGTTCAATTCAATCGTTTACCTTTGGTGGTGCTTTTAATGCTCTGTGAGACAGAGGAAGATCTTTATTTGAGCATAAAACAAGCAGTATTTAAGATATRTATAGCCTTCTACTCTGGACTAATTGTCAGCCTAGAAAAGGAACTTGCTCCATTATTTGAAGAATTGAGACAAGTTGTGGAAGTTTCTTGA

Related Sequences

bmy_17752T0 Protein

Length: 154 aa      View alignments
>bmy_17752T0
MKSDELSFVIVCAKDLKRFLYKKLPSVEGLHAIVVSDRDGVPVIKVANDNAPEHALRPGFLSTFALATDQGSKLGLSKNKSIICYYNTYQVVQFNRLPLVVLLMLCETEEDLYLSIKQAVFKIXIAFYSGLIVSLEKELAPLFEELRQVVEVS*