Part of scaffold_1585 (Scaffold)

For more information consult the page for scaffold_1585 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ZSCAN20 ENSTTRG00000002211 (Bottlenosed dolphin)

Gene Details

zinc finger and SCAN domain containing 20

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002067, Bottlenosed dolphin)

Protein Percentage 82.87%
cDNA percentage 83.61%
Ka/Ks Ratio 0.34422 (Ka = 0.0135, Ks = 0.0393)

ZSCAN20 ENSBTAG00000019555 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000026057, Cow)

Protein Percentage 89.19%
cDNA percentage 90.78%
Ka/Ks Ratio 0.27424 (Ka = 0.0612, Ks = 0.2232)

ZSCAN20  (Minke Whale)

Gene Details

zinc finger and SCAN domain containing 20

External Links

Gene match (Identifier: BACU009641, Minke Whale)

Protein Percentage 98.41%
cDNA percentage 99.17%
Ka/Ks Ratio 0.70372 (Ka = 0.0075, Ks = 0.0107)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2154 bp    Location:459880..442470   Strand:-
>bmy_17759
ATGGCTGTAGCCCTGGAAGCTGGGGCCCAGGCCTCCCCGCTACCAGAGCCTGAAGAACTCCTGATTGTCAAGCTGGAGGAGGACTCGTGGAGACCAGACTCCCAACCCCGGGAGAAGGACCATGACCCTGTCCCGGGCCCTGAGGCCTCCCGCCAGCGCTTCAGGCAGTTCCAGTACAGGGATGCGGCGGGACCCCACGAGGCCTTCAGCCAGCTCTGGGCACTCTGCTGTCACTGGCTGAGGCCGGAGATCCGCCTCAAAGAGCAGATACTGGAGTTGCTGGTGCTGGAGCAGTTCCTGACTATCTTACCCAGGGAGGTCCAGGCCTGGGTACAGGCGCACCACCCTGAGAGCGGCGAGGAGGCGGTGGCCCTGGTGGAGGATTGGCACCGAGAGGCGCGGGCCGCGGGACAGCGGGAACTGGAATTGTATGCAGAAGAGACCAGGTCCTTAAAGAACATGAAGGAATCTCAGAGCTTCCAGCTGTGGCCAGCAGATCACTGGCCCGAGGGACAGTCCCAGAAGCAGTGGGTGAAGAATCCATGTCCTGACCTTCCCAAGCATCTAGACACCAAGATGGCACCACAGCCCTTGAAAGAGAGTGCTGTCCTCACTCCCCGAGTCCCTACTCTACCAAAGATGGGGAGCGTTGGAGATTGGGAGGTGACAGTGGAGTCCCAGGAAGCCCTGGGTCCCGGCAGACACGCTGAGAAGGAATTCTGCAAGGACCCCCCAGGAGACAGCTGTGGGAACGGCCTGCCCCTGGGAGTTCCAGTTTCAAAACCAACCATCATCTCCCAGCAAGAGCAAGGACCAGAATTTTGGGGTCCAAGACTTGTAAATTCTGGACAAAAGAACCCTGCAGATTACAGCTGGGATACTGAGCAAACAAAACCAGCTCAGGCATTGGCCTGGAGGGATTCCAGGGCCTGGGAAGAACGATATCAGTGGGACGTGGAGGATGTGAAAGTATCAGGTGTGCACTGGAGCTATGAGGAGACTAAGACTTTCCTGGCAATTTTGAGTGAGTCTCCTTTTTCTGAAAAACTCCGGACTTGTCACCAGAACCGCCAGGTGTACCGGGCCATTGCAGAGCGGCTGAGGGCACAGGGCTTCCTGCGGACACTGGAGCAGTGTCGCTACAGAGTCAAAAACCTCCTACGGAATTACCGGAAAGCCAAGAGCAGCCACCCGCCGGGGACCTGCCCCTTCTATGAGGAGCTGGAGGCCCTGGTGAGGGCTCGGACGGCCATCAGAGCCTCAGATGGCCCAGGAGAGGCTGTGGCTCTCCCCAGGCTGGGGGACAGTGACATGGAGGTGGATGAGCAGGAGGAAGGGGGCTGGGAGCCTGAGGAAACAACGGACGACTGTAATGGTGATGACAGTCACCTGGCCACTGAAGAGTTCGTCCACGGACCCAGGATTCCAGGGGGCCCAGCTCTGCTCCAGAGTCGTATTGCAGGTGTGCACTGGGGCTACGAGGAGACCAAGGCCTTCCTGACCATTCTCAGTGAGTCCCCATTCTCTGAGAAGCTTCACACTTGTCACCAGAACAGCCAGGTATACCGGGCCATTGCAGAGCGGCTGTGTGCACAGGGCTTCCTGCGGACCCTGGAGCAGTGTCGCTACAGATTCAAAAACCTCCTTCGAAGCTACCGAAAAGCCAAGAGCAGCCACCCACCTGGGACCTGCCCCTTCTATGAGGAGCTGGACTCGCTGATGAGGGCTCGGACTGCGGTTAGAGACATGGGGACCAGCAAGGAGGCAGTGGGTCTTCCTACTTCTGGGGAGAGTGGTACCCAGGTTGTCAACCAGGAGGCCTGGGATGAAATGGCAGGTGAAGATGCCGTCAGACCTCCAACCCCAGGTCCTAAAACCCCAGACACTGGTTTTGAGATGAGGCATGAGGATGAAGACCAGATTTCAGAGCAGGACATTTTTGAAGATTTGCCTGGAGCCTTATCAAAGTGTACTGCAGAGGATGATTGCTACCCTCATGATTGGGGGGAAGACAGTGAAAATGAAAACGAAGGTAAAGGGCAGTGGGGAAATCCATCCCAGGATCAGTGGGAAGAATGTTCTTCTGAAGAGGACTTAGAAAAACTCATCGATCATCAAGGCCTGTACCTTGCAGAGAAACCCTACAAGTGTGAC

Related Sequences

bmy_17759T0 Protein

Length: 718 aa      View alignments
>bmy_17759T0
MAVALEAGAQASPLPEPEELLIVKLEEDSWRPDSQPREKDHDPVPGPEASRQRFRQFQYRDAAGPHEAFSQLWALCCHWLRPEIRLKEQILELLVLEQFLTILPREVQAWVQAHHPESGEEAVALVEDWHREARAAGQRELELYAEETRSLKNMKESQSFQLWPADHWPEGQSQKQWVKNPCPDLPKHLDTKMAPQPLKESAVLTPRVPTLPKMGSVGDWEVTVESQEALGPGRHAEKEFCKDPPGDSCGNGLPLGVPVSKPTIISQQEQGPEFWGPRLVNSGQKNPADYSWDTEQTKPAQALAWRDSRAWEERYQWDVEDVKVSGVHWSYEETKTFLAILSESPFSEKLRTCHQNRQVYRAIAERLRAQGFLRTLEQCRYRVKNLLRNYRKAKSSHPPGTCPFYEELEALVRARTAIRASDGPGEAVALPRLGDSDMEVDEQEEGGWEPEETTDDCNGDDSHLATEEFVHGPRIPGGPALLQSRIAGVHWGYEETKAFLTILSESPFSEKLHTCHQNSQVYRAIAERLCAQGFLRTLEQCRYRFKNLLRSYRKAKSSHPPGTCPFYEELDSLMRARTAVRDMGTSKEAVGLPTSGESGTQVVNQEAWDEMAGEDAVRPPTPGPKTPDTGFEMRHEDEDQISEQDIFEDLPGALSKCTAEDDCYPHDWGEDSENENEGKGQWGNPSQDQWEECSSEEDLEKLIDHQGLYLAEKPYKCD