Sequence detailsbmy_17770 (Coding sequence)

Part of scaffold_1617 (SequenceType object (1))

For more information consult the page for scaffold_1617 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

THBS4ENSTTRG00000001758 (Bottlenosed dolphin)

Gene Details

thrombospondin 4

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000001663, Bottlenosed dolphin)

Protein Percentage 98.18%
cDNA percentage 98.18%
Ka/Ks Ratio 0.14859 (Ka = 0.008, Ks = 0.0535)

THBS4ENSBTAG00000012866 (Cow)

Gene Details

Thrombospondin-4

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000036460, Cow)

Protein Percentage 96.97%
cDNA percentage 92.93%
Ka/Ks Ratio 0.04128 (Ka = 0.0143, Ks = 0.3469)

Additional orthologs identified in other species via the OPTIC pipeline.

THBS4 (Human)   Thbs4 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1488 bp    Location:488570..472215   Strand:-
Raw sequence 
>bmy_17770
ATGGAAAGAAGCTGCAGGAATCCAGAACTGAACCCTTGCAGCGTGAACGCACAGTGCATTGAAGAGAGGCAGGGGGATGTGACATGCGTGTGTAGGGTTGGCTGGGCTGGTGACGGCTACATCTGTGGAAAGGACTTGGACATTGACAGTTACCCTGACGAAGAATTGCTGTGCTCTGCCAGGAACTGCAAAAAGAGGAACGGTGACAAAGATATCTTTGGGGATGCCTGTGATAACTGCCGGAATGTCCTAAATAATGACCAGAAGGACACTGACGGGGATGGAAAAGGAGATGCCTGCGATGACGACATGGATGGAGATGGAATAAAAAACTTCCTGGACAACTGCCAGAAAGTTCCCAACCGTGATCAACAGGACAAAGATGGTGATGGCGTGGGGGATGCCTGTGACAGCTGTCCTTATGTCAGCAACCCTAACCAGTCTGACGTGGATAACGATCTGGTTGGGGACTCCTGTGACACCAATCAGGACAGTGATGGAGACGGGCACCAGGACAGTACAGACAACTGCCCCACTGTCATTAACAGTGCCCAGCTGGACACTGATAAGGATGGGATTGGTGACGAGTGTGATGATGATGATGACAATGACGGCATCCCGGACCTGGTGCCCCCTGGACCAGACAACTGCCGGCTGGTCCCCAACCCTGCCCAGGAGGACAGCAACAGYGACGGCGTGGGGGACATCTGCGAGACAGACTTCGACCACGACCAGGTCATCGATCGGATCGACGTGTGCCCAGAGAACGCAGAGGTCACCCTGACCGACTTCAGGGCCTATCAGACGGTGGTCCTGGACCCTGAAGGGGACGCCCAGATCGATCCCAATTGGGTGGTCCTGAACCAGGGCATGGAGATCGTGCAGACCATGAACAGCGATCCAGGCCTGGCAGTGGGGTACACGGCTTTTAATGGAGTGGACTTCGAAGGGACCTTCCACGTCAACACCCAGACGGACGATGATTATGCTGGCTTTATCTTCGGTTACCAAGACAGTTCCAGCTTCTACGTGGTCATGTGGAAGCAGACAGAGCAGACGTACTGGCAGGCCACCCCGTTCCGAGCTGTTGCAGAACCTGGCATTCAGCTCAAGGCCGTTAAGTCTAAGACGGGTCCGGGGGAGCATCTCCGCAACTCCCTGTGGCACACCGGGGACACCAGCGACCAGGTCAGGCTGCTGTGGAAGGACTCCAGGAACGTGGGCTGGAAGGACAAGGTGTCCTACCGCTGGTTCCTGCAGCACCGGCCCCAGGTGGGCTACATCAGGGTGCAGTTTTATGAAGGTTCCGAGTTGGTGGCTGACTCGGGGGTCACCATAGACACCACCATGCGTGGAGGCCGGCTCGGTGTGTTCTGCTTCTCCCAGGAAAACATCATTTGGTCCAACCTCAAATATCGCTGCAATGACACCATCCCAGAGGACTTCCAAGAATTTCAAACCCAGAATTTCGATCGCCTGGATAACTAA

Related Sequences

bmy_17770T0 SequenceType object (3)

Length: 496 aa      View alignments
>bmy_17770T0
MERSCRNPELNPCSVNAQCIEERQGDVTCVCRVGWAGDGYICGKDLDIDSYPDEELLCSARNCKKRNGDKDIFGDACDNCRNVLNNDQKDTDGDGKGDACDDDMDGDGIKNFLDNCQKVPNRDQQDKDGDGVGDACDSCPYVSNPNQSDVDNDLVGDSCDTNQDSDGDGHQDSTDNCPTVINSAQLDTDKDGIGDECDDDDDNDGIPDLVPPGPDNCRLVPNPAQEDSNSDGVGDICETDFDHDQVIDRIDVCPENAEVTLTDFRAYQTVVLDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNTQTDDDYAGFIFGYQDSSSFYVVMWKQTEQTYWQATPFRAVAEPGIQLKAVKSKTGPGEHLRNSLWHTGDTSDQVRLLWKDSRNVGWKDKVSYRWFLQHRPQVGYIRVQFYEGSELVADSGVTIDTTMRGGRLGVFCFSQENIIWSNLKYRCNDTIPEDFQEFQTQNFDRLDN*