Part of scaffold_1601 (Scaffold)

For more information consult the page for scaffold_1601 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ABCA12 ENSTTRG00000004240 (Bottlenosed dolphin)

Gene Details

ATP-binding cassette, sub-family A (ABC1), member 12

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004018, Bottlenosed dolphin)

Protein Percentage 86.99%
cDNA percentage 88.66%
Ka/Ks Ratio 0.56678 (Ka = 0.0216, Ks = 0.0382)

ABCA12 ENSBTAG00000003472 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000004518, Cow)

Protein Percentage 92.8%
cDNA percentage 93.11%
Ka/Ks Ratio 0.22018 (Ka = 0.0383, Ks = 0.1739)

ABCA12  (Minke Whale)

Gene Details

ATP-binding cassette, sub-family A (ABC1), member 12

External Links

Gene match (Identifier: BACU012679, Minke Whale)

Protein Percentage 96.87%
cDNA percentage 97.53%
Ka/Ks Ratio 0.55464 (Ka = 0.0212, Ks = 0.0382)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 5724 bp    Location:309626..234841   Strand:-
>bmy_17771
ATGATAGAACTCTTCATAAGGCTAAAGGAGATTCTCAATCAGATGGCTTCTGTCGCACGACCGCTGCTAGACAAAATGAGATCCCTGAAACAAATGCACCTGCCCAGAAGTTTTCCATTAACACAGGCAATGTACAGAAACAACCGGCTAAACACTCCGCAAGGATCATTTAGTACCATTTCCCAAGCACTGTGCTCCCAAGGAATTACCACTGAATATTTAGTTGCCATGCTGCCCTCTTCTCAGAGGCAGAGAGGCAACCACACCAAGGATTTTTTGACTTATAAATTACGTAAAGAGCAAATTGCTGCAAAATATGGAATTCCCTTACATGCCACACCATTTTGCTTTTCTCTTTATAAAGACATCATTAATATGCCTGCTGGACCTGTGATTTGGGCTTTCTTGAAACCCATGTTGTTGGGAAGGATTTTGTATGCACCATATACCCCCATCACAAAGGCAATAATGGAAAAGTCTAATGTAACTCTGAGGCAGCTGGCAGAATTAAAAGAAAAATCTCAAGAGTGGGTGGATAAGTCACCATTTTTCATGAATTCCTTCCACCTGTTAAACCAGACGATTCCAATTCTCCAGTCTTTCCATGAGTTACTCCATAATACTCTAAGAAACCCCTTTGTGCAAGTTTTTGTAAAATTCTCCGTGGGACTTGATGCTATTGAACTCTTGAAACAGATGGATGAACTCGATATTCTAAGGCTAAAATTAGAGAACGGCATTGACCTCATTGATCATCTTAACACACTGTCTTCCCTGACAGTAAATATTTCCTCCTGTATATTGTATGACCGTATTCAGGCAGCAAAAAGCATAGATGAAATGGAAAGAGAGGCTAAAAGACTCTACAAAAGCAATGAACTCTTTGGCAGTGTTATTTTTAAGCTTCCTTCTAATAGCAGCCAGCACAGAAGCTATGACTCTGAAAACGTCTCTCTTCCTCCTGTTGTAAAATATACCATCCGCATGAGTCTCAAGACCTCACAGACCACAAGAAGCATAAGAACCAAGATATGGGCCCCAGGGCCACACAATTCTCCATCAAACAACCAGATCTATGGCAGGGCTTTTGTTTACTTACAGGATAGTATTGAAAGAGCAATCATTGAATTGCAGACTGGAAGGAACTCCCAGGAAATAGCAGTCCAGGTCCAAGCAATTCCTTATCCCTGCTACATGAAAGACAACTTCCTAACCAGTGTCTCTTATTCCCTTCCAATTGTGCTCATGGTTGCCTGGGTTATATTTATAGCTGCATTTGTAAAAAAACTTGTTTATGAGAAAGACCTCCGACTTCATGAGCTAGGCAGAGAAACCAGGTCAGTTGCTAATTCAGTGAAGCCATTCACCTTTGAACTTGTTATGTACACACTATCCATCCTACTAGTGAGAATTTGGAATATTCCAATGCTTGACATTCTTGTTGAATTGAATGAAGACATTGCTGTCAATAAAAATATTATGGAATTTTATTACCTCAGTCCCTACATTGAATTTGAATACATGAAGATGATGGGTGTAAACTCCTGCAGCCACTTTTTTGCCTGGCTTATAGAGAGTGTTGGATTTTTACTGGTTACCATCATCATCCTCATCATTATACTCAAGTTTGGCAATATTCTTCCTAAAACAAATGGGTTCATTTTGTTCCTGTATTTTTCGGACTATAGCTTCTCAGTTCTTGCCATGAGCTACCTTATCAGTGTCTTCTTCAACAACACCAACATTGCAGCTCTGATTGGAAGCCTCATCTACATCATTGCCTTTTTTCCATTTATTGTTCTGGTTACAATTGAGAATGAGTTGAGCTATATAGTAAAAGTATTCATGAACCTGCTGTCCCCAACAGCTTTCAGCTATGCAAGTCAGTACATTGCACGATATGAGGAGCAGGGCATTGGTCTTCAGTGGGAAAACATGTACAGTTCCCCAGTTCAGGATGACACCACTTCTTTTGGCTGGCTATGCTGTCTAATCCTAGTCGACTCTTTCATTTATTTCCTTATAGCTTGGTATGTCAGGAACGTTTTCCCAGGTACATATGGTATGGCAGCTCCATGGTATTTTCCATTCCTTCCTTCCTATTGGAAGGAGCGATTGGGATGTGCAGAAGTGAAGCATGAGAAAAGCAATGGCCTTATGTTTACTAATATCATGATGCAGAACACCAGCCCATCTGCCAGTCCTGAATACATGTTTCCCTCCAACACTGAGTCTGAACCTAAAGATCTCACAGTTGGGGTTGCCCTGCATGGGGTCACAAAGAACTACGGCTCAAAAATTGCTGTTGCTAACCTCAGTCTGAACTTTTATGAAGGGCATATTACTTCATTGCTGGGGCCCAATGGCGCTGGGAAAACTACTACCATCTCCCTGTTGACTGGGCTGTTTGATGCCTCAGCAGGTACCATCTTTGTTTATGGAAAAGATATCAAAACAGATCTCCACACCGTGAGGAAGAGCCTGGGGGTCTGCATGCAACATGATGTCCTGTTCAGTTACCTCACTACCAAGGAGCACCTCCTCTTATACGGCTCCATCAAATCTCCTCACTGGACTAAAAAGGAGCTGCACGAGGAAGTAAAAAGAACAATCATTCTGTCGACACACCACTTGGACGAGGCTGAAGTGCTGAGTGACCGCATCGCCTTCCTGGAGGAGGGTGGGCTGCGCTGCTGCGGGTCACCATTTTATCTCAAGGAAGCCTTTGGGGACGGGTATCACCTCACACTCACCAAGAAAAAGAGTCCAAATGTAAATGCAAGTACAGTATGTGACACGACAGCTGTGACAGCAGTGATCCAGTCACATCTCCCTGAAGCCTACCTCAAGGAGGACATCGGGGGAGAGCTTGTCTATGTGCTTCCTCCGTTTAGCACCAAAGTCTCAGGGGCCTATCTTTCACTCCTGAGAACACTGGACAATGGCCTGAGTGACCTCAACATCGGGTGCTACGGCATTTCAGATACCACCATGGAAGAGAAGAATAATGATATGAGTCTTGAGCACTTAACACAAAAGAAAATTGGAAATTCCAGTACCAGTGGCATCTCAACTCCTGATGATTTATCTGTGAGCAGCAGCAATTTCACAGACAGAGATGACAAAATCCTGACCAGAGGAGAGAGATTGGATGGTTTTGGACTGTTACTGAAGAAGATAATGGCTATACTCATTCAGAGGTTCCACCACACCCGCAGGAACTGGAAAGGTTTCATAGCTCAGGTTATTCTCCCCATCATCTTTGTAACCACCGCCATGGGCCTTGGCACGCTAAGAAGTTCCAGCAACAGCTATCCGGAGATCCAGATCTCCCCGTCTCTTTACGGTACCTCTGAACAGACAACCTTCTATGCAAATTCTCACCCAAGCACAAAAGAACTGGTCTCAGCAATGTGGAGCTTCCCTGGCATTGACAACATAAGGTGTTTAAAGAAAGACAGTCTGGGAAAATGGAACAGCAGTGGAGAACCTATCACTAATTTTGGTGTTTGCTCCTGCTCAGAAAATATCCAGGAATGTCCTAAATTTAACTATTCTCCACCTCATAGAAGAACTTATTCTTCCCAAGTAATTTATAACCTCACTGACCACCACTTGGAAAACTATCTTATATCAACTGCCAATAAGTTTATGCAAAAAAGATATGGAGGTTGGAGTTTTGGGCTGCCTTTGACTAAAGACCTTCGTTTTGATATAACAGCAGTTCCTGCTAATAGAACACTTGCCAAGGTATGGTATGATCCAGAAGGCTATCACTCCCTTCCAGCTTACCTCAACAGCTTGAATAATTTCCTCCTGCGAGTTAACATGTCAAAATACGATGCTGCCCGACATGGAGTGCAAGACCAAGAACAAGCCACAATGAGCAGCTTAATCGATATTTTAGTGGCACTCTCCATCCTGCTGGGCTACTCTGTCACCACTGCCAGCTTTGTCACCTATGTTGTACGGGAGCATCAGACCAAAGCCAAGCAGCTGCAGCACATTTCAGGCATTGGTGTCACATGCTACTGGGTAACAAACTTCATTTATGACATGGCCTTCTATTTGGTGCCTGTAGCATTTTCAATTGGTGTCATTGCAATTTTCAAGATACCTGCCTTCTACAGTGAAAACAACCTAAGCGCTGTATCTCTCCTACTTCTGTTGTTTGGGTATGCCACATTTTCTTGGATGTACTTGCTGGCTGGGCTCTTCCATGAAACAGGAGTGGCTTTCATCACTTATGTCTGCATCAACCTTTTTTTTGGCATCAATTCCATTGTTTCCCTGTCGGTGGTGTACTTCCTTTCCAAGGAAAAGCCTAATGATATGACTTTAGAACTTATTTCTGAAACCCTCAAGCGCATTTTCCTGATTTTCCCGCAGTTCTGTTTTGGCTATGGTTTGATTGAACTTTCTCAACAACAGTCAGTCCTAGACTTCTTAAAAGCATATGGAGTGGAATATCCAAGTGAAACCTTTGAGATGGATAAACTAGGTGCAATGTTTGTGGCTTTGGTTTCTCAAGGAACCATGTTCTTTTTCTTGCGACTTTTAATCAATGAGTGGCTAATAAATAAACTCAGACTCTGCTTCAAAAAATTTCATTCTTCACCTGTTATTGAGACAATAGTTGAAGATGAAGATGTGTGGGCTGAGAGGTTTAGAGTTGAGAATGGTGTGAATGAATATGACCTGGTCCAACTCCATCGTCTTACAAAGACCTACCACCTTATCCACAAAAAGATTATAGCTGTAAACAACATCAGCATTGGGATACCTGCTGGGGAGTGCTTTGGCCTTCTTGGGGTGAATGGAGCAGGAAAGACCACCATCTTCAAGATGCTGACTGGAGACATAATTCCTACAAGTGGAAACATTCTGATCAGAAATAAGTTTGGGTCTCTGACTCACGTGGACTCTCACAGCTCATTAATTGGCTACTGTCCTCAGGAAGATGCTTTGGATGACCTGGTAACCGTGGAAGAACATTTGTATTTCTATGCTAGGATACATGGAATTCCAGAAAAAGACATTAAAGAAACTGTTCATAAACTCCTTAGGAGGCTTTACCTGATGCCCTACAAGGACAAAACTACCTCTATGTGTAGTTATGGCACAAAAAGAAAATTATCCACTGCACTGGCCTTGATAGGGAAACCTTCCATACTGTTGCTGGATGAGCCAAGCTCTGGGATGGATCCTAAATCAAAACGGCACCTCTGGAAGATCATTTCAGAAGAAGTACAGAATAAATGTTCCGTCATCCTCACTTCTCACAGCATGGAGGAATGTGAAGCTCTCTGTACCAGGTTGGCCATTATGGTGAATGGAAGGTTCCAATGTATTGGATCATTGCAGCATATTAAGAGCAGGTTTGGACGAGGATTTACCGTCAAGGTTCAYGTGAAGAATGCTAGAGTGAGCATGGAGCCCCTCACAAGGTTCATGCAACTTCACTTTCCAAAAACATACTTAAAAGATCAGCACCTCAGCATGCTAGAGTATCATGTGCCGGTCACCGCAGGAGGAGTAGCAAACATTTTTGATCTGCTGGAAACCAACAAGACTGCTTTAAATATCACAAATTTCTTAGTGAGTCAGACTACTCTGGAAGAGGTTTTCATCAACTTTGCCAAAGACCAAAAGTGCTATGAAACTGCCGATACCAGTAGCCAAGGTTCCACCATAAGCACTGACTCACAAGATGACCAGCTGTAG

Related Sequences

bmy_17771T0 Protein

Length: 1908 aa      View alignments
>bmy_17771T0
MIELFIRLKEILNQMASVARPLLDKMRSLKQMHLPRSFPLTQAMYRNNRLNTPQGSFSTISQALCSQGITTEYLVAMLPSSQRQRGNHTKDFLTYKLRKEQIAAKYGIPLHATPFCFSLYKDIINMPAGPVIWAFLKPMLLGRILYAPYTPITKAIMEKSNVTLRQLAELKEKSQEWVDKSPFFMNSFHLLNQTIPILQSFHELLHNTLRNPFVQVFVKFSVGLDAIELLKQMDELDILRLKLENGIDLIDHLNTLSSLTVNISSCILYDRIQAAKSIDEMEREAKRLYKSNELFGSVIFKLPSNSSQHRSYDSENVSLPPVVKYTIRMSLKTSQTTRSIRTKIWAPGPHNSPSNNQIYGRAFVYLQDSIERAIIELQTGRNSQEIAVQVQAIPYPCYMKDNFLTSVSYSLPIVLMVAWVIFIAAFVKKLVYEKDLRLHELGRETRSVANSVKPFTFELVMYTLSILLVRIWNIPMLDILVELNEDIAVNKNIMEFYYLSPYIEFEYMKMMGVNSCSHFFAWLIESVGFLLVTIIILIIILKFGNILPKTNGFILFLYFSDYSFSVLAMSYLISVFFNNTNIAALIGSLIYIIAFFPFIVLVTIENELSYIVKVFMNLLSPTAFSYASQYIARYEEQGIGLQWENMYSSPVQDDTTSFGWLCCLILVDSFIYFLIAWYVRNVFPGTYGMAAPWYFPFLPSYWKERLGCAEVKHEKSNGLMFTNIMMQNTSPSASPEYMFPSNTESEPKDLTVGVALHGVTKNYGSKIAVANLSLNFYEGHITSLLGPNGAGKTTTISLLTGLFDASAGTIFVYGKDIKTDLHTVRKSLGVCMQHDVLFSYLTTKEHLLLYGSIKSPHWTKKELHEEVKRTIILSTHHLDEAEVLSDRIAFLEEGGLRCCGSPFYLKEAFGDGYHLTLTKKKSPNVNASTVCDTTAVTAVIQSHLPEAYLKEDIGGELVYVLPPFSTKVSGAYLSLLRTLDNGLSDLNIGCYGISDTTMEEKNNDMSLEHLTQKKIGNSSTSGISTPDDLSVSSSNFTDRDDKILTRGERLDGFGLLLKKIMAILIQRFHHTRRNWKGFIAQVILPIIFVTTAMGLGTLRSSSNSYPEIQISPSLYGTSEQTTFYANSHPSTKELVSAMWSFPGIDNIRCLKKDSLGKWNSSGEPITNFGVCSCSENIQECPKFNYSPPHRRTYSSQVIYNLTDHHLENYLISTANKFMQKRYGGWSFGLPLTKDLRFDITAVPANRTLAKVWYDPEGYHSLPAYLNSLNNFLLRVNMSKYDAARHGVQDQEQATMSSLIDILVALSILLGYSVTTASFVTYVVREHQTKAKQLQHISGIGVTCYWVTNFIYDMAFYLVPVAFSIGVIAIFKIPAFYSENNLSAVSLLLLLFGYATFSWMYLLAGLFHETGVAFITYVCINLFFGINSIVSLSVVYFLSKEKPNDMTLELISETLKRIFLIFPQFCFGYGLIELSQQQSVLDFLKAYGVEYPSETFEMDKLGAMFVALVSQGTMFFFLRLLINEWLINKLRLCFKKFHSSPVIETIVEDEDVWAERFRVENGVNEYDLVQLHRLTKTYHLIHKKIIAVNNISIGIPAGECFGLLGVNGAGKTTIFKMLTGDIIPTSGNILIRNKFGSLTHVDSHSSLIGYCPQEDALDDLVTVEEHLYFYARIHGIPEKDIKETVHKLLRRLYLMPYKDKTTSMCSYGTKRKLSTALALIGKPSILLLDEPSSGMDPKSKRHLWKIISEEVQNKCSVILTSHSMEECEALCTRLAIMVNGRFQCIGSLQHIKSRFGRGFTVKVHVKNARVSMEPLTRFMQLHFPKTYLKDQHLSMLEYHVPVTAGGVANIFDLLETNKTALNITNFLVSQTTLEEVFINFAKDQKCYETADTSSQGSTISTDSQDDQL*