Part of scaffold_1595 (Scaffold)

For more information consult the page for scaffold_1595 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PLD1 ENSTTRG00000005218 (Bottlenosed dolphin)

Gene Details

phospholipase D1, phosphatidylcholine-specific

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004926, Bottlenosed dolphin)

Protein Percentage 96.45%
cDNA percentage 97.59%
Ka/Ks Ratio 0.38307 (Ka = 0.0169, Ks = 0.0442)

PRKCSH ENSBTAG00000017490 (Cow)

Gene Details

phospholipase D1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000042452, Cow)

Protein Percentage 93.02%
cDNA percentage 93.64%
Ka/Ks Ratio 0.24395 (Ka = 0.0367, Ks = 0.1505)

PLD1  (Minke Whale)

Gene Details

phospholipase D1, phosphatidylcholine-specific

External Links

Gene match (Identifier: BACU017817, Minke Whale)

Protein Percentage 98.31%
cDNA percentage 98.47%
Ka/Ks Ratio 0.2705 (Ka = 0.0087, Ks = 0.0321)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2220 bp    Location:126463..70868   Strand:-
>bmy_17773
GTCGCTGCAAACGGCATTATTTYGTTCTTTTTTCTATTTGACCAAAATAATAAGTCTAGTAACCCTTTTCTTCTTTCCTTTGCTTTTACCCTGTCTCAAGCCAACATGTCACTGAAAGATGAGCCAAGACTAAATACCTCTGCACTGCAGAAAATCGCTGCTGACATGAGTAATTTGATAGAAAATCTGGACACGCGGGAGCTCCACTTTGAGGGAGAGGAGGTGGACTACGATGTGTCTCCCAGCGATCCCAGGATACAGGAAGTGTATATCCCTTTCTCTGCTATTTATAAGACTCAAGGATTTAAGGAGCCTAATACACAGACGTATCTCTCCGGCTGTCCAATAAAAGTTCAAGTTCTGGAAGTGGAGCGCTTAACATCTACAAAAAGGGTACCAAGCATCAATCTTTACACTATTGAATTAACACATGGGGAATTTAAATGGCAAGTTAAGAGGAAGTTCAAGCACTTCCAAGARTTTCACAGAGAGCTGCTCAAGTACAAAGCCTTTATCCGAATTCCCATTCCCACCAGAAGACACACATTTAGAAGACAGAATGTCAAAGAAGAGCCTCGAGAGATGCCAAGTTTGCCCCGTTCATCTGAAAACACGATCCAAGAAGAACAGTTCTTTGGTAGAAGGAAACAACTAGAGGATTACTTGACAAAATTACTAAAAATGCCCATGTATAGAAACTATCATGCAACAGCAGAATTCCTTGATATAAGCCAGCTGTCCTTCATCCATGATTTGGGACCAAAGGGCATAGAAGGTATGATAATGAAAAGATCCGGTGGACACAGAATACCAGGCTTGAACTGCTGTGGTCAGGGAAGGGCCTGCTACCGGTGGTCCAAAAGGTGGTTGATAGTAAAAGATTCCTTTTTACTATATATGAAACCAGACAGCGGTGCTATTGCCTTCGTCCTGCTGGTAGATAAAGAATTCAGAGTTAAGGTGGGAAAGAAGGAGACGGAGACGAAATATGGACTCCGAATTGATAATCTTTCAAGGACACTGATTTTAAAATGCAACAGCTATAGACATGCTCGGTGGTGGGGAGGGGCTATAGAAGAATTCATCCATAAACATGGCCCCAACTTTCTCAAAGATCATCGATTTGGGTCTTATGCTGCTATCCAAGAGAACACTTTAGCTAAATGGTATGTTAATGCCAAAGGATATTTTGAAGATGTGGCGAATGCAATGGAAGAGGCGAAAGAAGAGATTTTTATCACAGATTGGTGGTTGAGTCCAGAAATCTTCCTGAAACGTCCAGTGGTTGAAGGAAATCGTTGGAGGTTGGACTGCATTCTTAAGCGAAAAGCACAACAGGGGGTGCGGATCTTCATTATGCTCTACAAAGAGGTGGAACTCGCTCTTGGAATCAATAGTGAATACAGCAAGAGGACTTTGGTGCATCTACACCCCAACATAAAGGTGATGAGGCACCCAGATCATGTGTCATCCAGTGTATATCTGTGGGCTCATCACGAGAAACTCATCATCATCGACCAGTCAATGGCCTTTGTGGGTGGGATTGACCTGGCCTATGGAAGGTGGGATGACAATGAACACAGACTCACGGACGTGGGCAGCGTGACGCGCGTCACCGGGGGACCTTCTCTGGGTTCCCTCACAGCTGAAACAACAGAGACTATGGAATCCTTAAGCCTCAAAGATAAAAACGAATCTAACAAAAATCTGCCTGTCCTGAAGACTGTTGATGATGCAGATTCAAAACTGAAAGGAATAGGAAAGCCCAGAAAGTTCTCCAAATTCAGCCTCTACAGGCAGCTGCACAGACACCACCTACGCAGCACAGACAGCATCAGCAGCCTCGACAGCGCCTCCAACACGGGCTCCATCCGAAGTTTACAGACAGGTGTGGGAGAGCTACATGGGGAAACCAGATTCTGGCATGGAAAGGACTACTGCAATTTTGTCTTCAAAGACTGGGTTCAACTTGATAAACCTTTTGCTGATTTCATTGACAGGCACTCCACCCCCCGGATGCCATGGCACGACATCGCCTCTGCAGTCCACGGGAAGGCGGCTCGCGACGTGGCCCGTCACTTCATCCAGCGCTGGAACTTCACGAAGATTATGAAACCAAAATATCGGTCCCTTTCTTATCCTTTTCTGCTTCCAAAATCTCAAACAACAGCCCATGAGTTGAAATACCAAGTGCCCGAGTCTGTCCATGCTAATGTACAG

Related Sequences

bmy_17773T0 Protein

Length: 740 aa      View alignments
>bmy_17773T0
VAANGIIXFFFLFDQNNKSSNPFLLSFAFTLSQANMSLKDEPRLNTSALQKIAADMSNLIENLDTRELHFEGEEVDYDVSPSDPRIQEVYIPFSAIYKTQGFKEPNTQTYLSGCPIKVQVLEVERLTSTKRVPSINLYTIELTHGEFKWQVKRKFKHFQEFHRELLKYKAFIRIPIPTRRHTFRRQNVKEEPREMPSLPRSSENTIQEEQFFGRRKQLEDYLTKLLKMPMYRNYHATAEFLDISQLSFIHDLGPKGIEGMIMKRSGGHRIPGLNCCGQGRACYRWSKRWLIVKDSFLLYMKPDSGAIAFVLLVDKEFRVKVGKKETETKYGLRIDNLSRTLILKCNSYRHARWWGGAIEEFIHKHGPNFLKDHRFGSYAAIQENTLAKWYVNAKGYFEDVANAMEEAKEEIFITDWWLSPEIFLKRPVVEGNRWRLDCILKRKAQQGVRIFIMLYKEVELALGINSEYSKRTLVHLHPNIKVMRHPDHVSSSVYLWAHHEKLIIIDQSMAFVGGIDLAYGRWDDNEHRLTDVGSVTRVTGGPSLGSLTAETTETMESLSLKDKNESNKNLPVLKTVDDADSKLKGIGKPRKFSKFSLYRQLHRHHLRSTDSISSLDSASNTGSIRSLQTGVGELHGETRFWHGKDYCNFVFKDWVQLDKPFADFIDRHSTPRMPWHDIASAVHGKAARDVARHFIQRWNFTKIMKPKYRSLSYPFLLPKSQTTAHELKYQVPESVHANVQ