Part of scaffold_1604 (Scaffold)

For more information consult the page for scaffold_1604 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

STRN3 ENSTTRG00000005127 (Bottlenosed dolphin)

Gene Details

striatin, calmodulin binding protein 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004830, Bottlenosed dolphin)

Protein Percentage 90.52%
cDNA percentage 91.2%
Ka/Ks Ratio 0.41227 (Ka = 0.0125, Ks = 0.0304)

STRN3 ENSBTAG00000021845 (Cow)

Gene Details

Striatin-3

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000029119, Cow)

Protein Percentage 97.63%
cDNA percentage 96.5%
Ka/Ks Ratio 0.12046 (Ka = 0.0135, Ks = 0.1118)

STRN3  (Minke Whale)

Gene Details

striatin, calmodulin binding protein 3

External Links

Gene match (Identifier: BACU008695, Minke Whale)

Protein Percentage 98.14%
cDNA percentage 98.7%
Ka/Ks Ratio 0.49485 (Ka = 0.0109, Ks = 0.0221)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1935 bp    Location:297393..242147   Strand:-
>bmy_17802
ATGTTAGAATATGCATTAAAACAAGAAAGGGCAAAATATCACAAATTAAAATACGGCACAGAACTGAACCAAGGTGATTTGAAAATGCCAACCTTTGAATCAGAAGAAACCAAAGACACGGAGGCTCCCACAGCACCTCAGAATAGCCAGTTAACGTGGAAGCAGGGCAGACAGCTGTTAAGACAATATCTTCAGGAAGTAGGTTACACAGATACAATATTAGATGTACGGTCTCAGCGGGTAAGATCATTACTTGGGCTATCTAATTCAGAACGAAATGGATCAGTAGAGACAAAGAACTTAGAACAGATCCTGAATGGAGGTGAATCTCCTAAGCAAAAAGGACAAGAAATCAAAAGGCCTTCTGGTGATGTTCTTGAGACATTCAATTTCTTAGAAAATGCTGATGACAGCGATGAAGAAGAGGAAAATGACATGATTGAAGGCATCCCAGAAGGAAAAGATAAACATCGGATAAATAAACACAAAATAGGTAATGAAGGTTTAGCTGCTGACCTAACCGATGATCCTGATACTGAGGAAGCACTGAAAGAATTTGATTTTTTAGTGACTGCTGAAGACGGTGAAGGAGCTGGAGAAGCACGGAGTTCAGGGGATGGCACAGAATGGGGTAAGCTTGCATTGCCAACTGCTGATTTTTTTTCTTTTAATAATATGCTGCATGTAGATAAAGATGACCTCTCCCCAACTACTGAGGTTTGGGATGTAGACCAGGGACTAATAAGTAAACTGAAGGAACAGTACAAGAAGGAACGAAAGGGGAAGAAAGGGGTAAAGAGTTGTGTTATTGATCAAGTGGGAAATCATTTTAAATATGTGGTTATGGCCTATGACAATGTTGACTTTTTATACTATGATGAGAAACTAAGAGAGCTCATGGGGGTCAACAGGACAAAACTCTACGACATGATAGCTGATCTGGGAGATGATGAGCTGCCCCTCATCCCTTCAGGAATCATAAATCAGTCTAGGTCAGCCTCTACTAGAACTGATCATGAAGGTGCAAGAGCAGAGGAAGCTGAACCAATAACGTTTCCATCTGGAGGAGGCAAGTCATTTATTATGGGTTCTGATGATGTTTTGTTAAGTGTACTGGGCCTTGGAGACCTTGCAGACTTGACGGTAACAAATGATGCAGACTATAGTTATGATGACTTTGGGTTTACCCTGATGATTAGGAGTGCCTCTTTAGATGTAGAGCCTATCTACACATTTAGGGCCCACATTGGTCCTGTTCTATCATTAGCTATTAGTTCTAATGGAGAACAGTGTTTTAGTGGTGGTATTGATGCAACTATCCAGTGGTGGAATATGCCTAGTCCTAATGTGGATCCATATGATACATATGAGCCAAATGTTCTAGCTGGCACTTTAGTTGCTCATACAGATGCTGTCTGGGGTCTTGCTTATAGTGGCATAAAAAATCAATTACTGTCATGTTCAGCAGATGGCACTGTTAGATTATGGAATCCACAAGAAAAATTGCCATGTATTTGCACTTACAATGGAGACAAGGAGCATGGAATACCTACATCGGTTGACTTTATAGGCTGTGATCCAGCTCATATGGTGACCTCTTTCAACACTGGTAGTACAGTAATTTATGATTTAGAAACATCACAGTCATTGGTGATGCTTTCATCACAGATAGATTCTGGTAAAATGATCCATTCTATGGTAGCTCATTTGGATGCTGTTACAAGTCTAGCAGTAGATCCTAATGGAATCTACTTGATGTCTGGAAGCCATGACTGTTCTATTAGATTGTGGAATTTGGACAGCAAGACATGTGTGCAAGAAATAACAGCACATAGGAAAAAATTAGATGAATCAATTTATGATGTTGCTTTCCATCCATCAAAAGCATATATTGCTAGTGCAGGGGCTGATGCCCTTGCCAAAGTATTTGTGTGA

Related Sequences

bmy_17802T0 Protein

Length: 645 aa      View alignments
>bmy_17802T0
MLEYALKQERAKYHKLKYGTELNQGDLKMPTFESEETKDTEAPTAPQNSQLTWKQGRQLLRQYLQEVGYTDTILDVRSQRVRSLLGLSNSERNGSVETKNLEQILNGGESPKQKGQEIKRPSGDVLETFNFLENADDSDEEEENDMIEGIPEGKDKHRINKHKIGNEGLAADLTDDPDTEEALKEFDFLVTAEDGEGAGEARSSGDGTEWGKLALPTADFFSFNNMLHVDKDDLSPTTEVWDVDQGLISKLKEQYKKERKGKKGVKSCVIDQVGNHFKYVVMAYDNVDFLYYDEKLRELMGVNRTKLYDMIADLGDDELPLIPSGIINQSRSASTRTDHEGARAEEAEPITFPSGGGKSFIMGSDDVLLSVLGLGDLADLTVTNDADYSYDDFGFTLMIRSASLDVEPIYTFRAHIGPVLSLAISSNGEQCFSGGIDATIQWWNMPSPNVDPYDTYEPNVLAGTLVAHTDAVWGLAYSGIKNQLLSCSADGTVRLWNPQEKLPCICTYNGDKEHGIPTSVDFIGCDPAHMVTSFNTGSTVIYDLETSQSLVMLSSQIDSGKMIHSMVAHLDAVTSLAVDPNGIYLMSGSHDCSIRLWNLDSKTCVQEITAHRKKLDESIYDVAFHPSKAYIASAGADALAKVFV*