Part of scaffold_1604 (Scaffold)

For more information consult the page for scaffold_1604 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HECTD1 ENSTTRG00000003749 (Bottlenosed dolphin)

Gene Details

HECT domain containing E3 ubiquitin protein ligase 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003547, Bottlenosed dolphin)

Protein Percentage 91.54%
cDNA percentage 91.11%
Ka/Ks Ratio 0.13279 (Ka = 0.0052, Ks = 0.039)

HECTD1 ENSBTAG00000032477 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000053792, Cow)

Protein Percentage 99.41%
cDNA percentage 96.84%
Ka/Ks Ratio 0.02027 (Ka = 0.0026, Ks = 0.1303)

HECTD1  (Minke Whale)

Gene Details

HECT domain containing E3 ubiquitin protein ligase 1

External Links

Gene match (Identifier: BACU008697, Minke Whale)

Protein Percentage 99.76%
cDNA percentage 99.55%
Ka/Ks Ratio 0.08003 (Ka = 0.0012, Ks = 0.0152)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 7695 bp    Location:481093..413967   Strand:-
>bmy_17804
AGATGTCCTCCTCGCACTTTCTTACCAGCCCTCTGCAAAATTTTTCTTGACGAAAGTGCTCCAGACAATGTGCTAGAGGTGACAGCCCGTGCCATAACATACTACCTGGACGTATCTGCAGAATGCACTCGAAGGATTGTTGGGGTAGATGGAGCTATAAAAGCACTTTGCAATCGTTTGGTTGTAGTCGAACTTAACAACAGGACAAGCAGAGACTTAGCTGAACAATGTGTAAAGGTGTTAGAACTGATATGCACTCGTGAGTCAGGAGCAGTCTTCGAGGCTGGTGGTTTGAATTGTGTGCTTACCTTCATTCGTGACAGTGGACACCTGGTTCATAAAGATACCTTGCACTCTGCCATGGCTGTGGTATCAAGACTCTGTGGCAAAATGGAACCTCAAGATTCTTCTTTAGAAATTTGTGTAGAATCTCTGTCTAGTTTATTAAAACATGAAGATCATCAGGTTTCAGATGGAGCTCTGCGATGTTTTGCATCACTAGCTGACCGATTTACCCGTCGTGGTGTTGACCCAGCTCCATTAGCCAAGCACGGATTAACTGAGGAGCTATTGTCTAGAATGGCTGCTGCTGGTGGTACTGTATCAGGGCCATCATCAGCTTGCAAACCAGGTCGCAGCACCACAGGAGCGCCTTCCACAGCTGCAGATTCCAAATTGAGTAACCAGGTGTCAACAATTGTAAGTCTGCTCTCAACACTTTGCAGAGGCTCTCCAGTAGTAACGCACGATCTCCTGAGGTCAGAGCTTCCAGATTCAATTGAAAGTGCATTGCAGGGTGATGAAAGATGTGTCCTTGATACCATGCGTTTGGTTGACCTTCTCTTGGTGCTATTATTTGAAGGACGAAAAGCTTTGCCAAAGTCTAGTGCTGGATCCACAGGCAGAATCCCAGGACTCCGGAGATTGGATAGTTCTGGGGAGCGCTCACATCGGCAGCTTATAGACTGTATTCGAAGTAAAGATACCGATGCACTCATAGATGCAATTGACACAGGAGCCTTTGAAGTAAATTTTATGGATGATGTAGGTCAGACTCTATTAAACTGGGCCTCTGCTTTTGGAACTCAGGAAATGGTAGAATTTCTTTGTGAAAGAGGTGCTGATGTTAATAGAGGTCAAAGGTCATCATCATTACATTATGCTGCATGTTTTGGAAGACCTCAAGTAGCAAAGACTCTCTTACGGCATGGTGCAAATCCAGATTTGAGAGATGAAGATGGGAAAACTCCACTAGATAAAGCTCGGGAAAGGGGCCATAGTGAAGTAGTAGCTATTCTTCAGTCTCCAGGTGATTGGATGTGTCCAGTTAATAAAGGAGATGATAAGAAAAAGAAAGATACAAACAAAGATGAAGAAGAATGTAATGAGCCGAAAGGAGATCCAGAAATGGCACCCATATACTTGAAAAGGTTACTGCCAGTATTTGCACAAACATTTCAGCAGACTATGCTGCCTTCTATAAGGAAAGCAAGTCTTGCTCTGATTCGAAAAATGATTCATTTTTGCTCTGAAGCACTGTTGAAAGAAGTTTGTGATTCTGATGTTGGTCACAATTTGCCTACAGTACTAGTGGAAATCACTGCAACAGTTCTTGATCAAGAGGACGACGATGATGGCCACTTGCTGGCTTTGCAGATCATAAGGGACTTAGTAGATAAAGGTGGTGATATTTTTTTGGATCAGCTAGCCAGACTTGGTGTAATTAGCAAAGTGTCAACTTTGGCAGGTCCTTCCTCTGATGATGAGAATGAAGAGGAATCAAAACCAGAAAAAGAAGATGAACCACAGGAAGATGCTAAAGAATTGCAGCAGGGTAAGCCATATCATTGGAGAGACTGGTCCATCATTAGGGGAAGGGACTGCTTATATATATGGAGTGATGCAGCAGCCTTGGAACTATCTAATGGCAGTAATGGATGGTTTAGATTTATCTTGGATGGAAAACTTGCCACCATGTATTCAAGTGGTAGTCCTGAAGGTGGATCGGATAGTTCAGAAAGCAGAAGTGAATTCTTAGAGAAGTTACAAAGAGCTCGAGGCCAAGTAAAGCCATCTACTTCAAGTCAACCTATACTCTCAGCACCAGGACCCACTAAACTCACTGTAGGRAACTGGTCACTAACATGTTTGAAAGAAGGAGAAATTGCTATTCATAACTCAGATGGCCAGCAAGCAACGATATTGAAAGAAGATTTACCTGGTTTTGTGTTTGAATCTAATAGAGGAACCAAGCATTCATTTACTGCAGAAACTTCTCTGGGTTCAGAATTCGTGACTGGCTGGACTGGCAAAAGAGGCAGAAAACTAAAATCTAAGTTAGAAAAAACTAAGCAAAAGGTACGAACTATGGCTCGAGATTTATATGATGACCACTTTAAAGCTGTTGAAAGCATGCCTCGCGGAGTAGTGGTAACACTCAGAAACATAGCAACTCAGTTAGAGTCATCTTGGGAACTTCATACAAATAGACAATGTATTGAGAGTGAGAACACTTGGAGAGATTTAATGAAGACAGCTTTAGAAAATCTAATTGTACTTTTGAAAGATGAAAACACAATTTCACCATATGAAATGTGCAGTAGTGGCTTGGTGCAAGCGCTTCTTACTGTTTTAAATAATAGCATGGATTTAGATATGAAGCAAGATTGTAGTCAACTGGTAGAAAGAATAAATGTTTTTAAAACAGCCTTTAGTGAAAATGAAGATGATGAAAGTCGACCAGCTGTTGCATTAATCCGAAAGTTAATAGCTGTACTAGAATCTATTGAACGTCTACCTCTCCATTTGTATGATACACCAGGATCCACTTATAACCTCCAGATACTTACAAGAAGATTAAGATTTCGGTTGGAACGTGCACCTGGTGAAACTGCATTGATAGACAGGACCGGCAGGATGTTGAAGATGGAACCCTTAGCTACAGTTGAATCTCTAGAACAGTATCTCTTAAAAATGGTAGCAAAGCAGTGGTATGATTTTGACCGATCTTCATTTGTTTTTGTTCGAAAATTAAGAGAAGGCCAAAATTTTGTATTTCGGCACCAGCATGATTTTGATGAAAATGGAATCATTTACTGGATTGGGACAAATGCCAAAACTGCATATGAATGGGTTAATCCAGCTGCTTATGGACTTGTAGTAGTAACATCATCAGAAGGAAGAAATCTACCTTATGGCCGCTTAGAAGACATATTAAGTCGTGACAATTCAGCTTTAAATTGTCATAGCAATGATGATAAGAATGCCTGGTTTGCCATAGATCTGGGTCTCTGGGTGGTACCATCAGCATATACACTTCGTCATGCTCGTGGTTATGGAAGGTCTGCACTGAGAAATTGGGTTTTCCAGGTATCCAAAGATGGACAGAACTGGACTTCTTTGTATACCCATGTTGATGACTGCAGTCTCAATGAACCAGGGTCAACAGCCACCTGGCCTCTTGATCCACCGAAGGATGAGAAACAAGGGTGGCGACATGTGAGAATTAAACAGATGGGGAAGAATGCAAGTGGCCAAACCCATTATCTCTCACTATCTGGATTTGAACTTTATGGCACTGTAAATGGAGTATGTGAAGATCAGCTAGGAAAAGCAGCTAAGGAAGCAGAAGCTAACCTTAGAAGACAGAGACGTCTAGTACGCTCCCAGGTACTGAAGTACATGGTTCCAGGGGCTCGTGTGATCAGAGGCCTTGATTGGAAATGGCGGGATCAGGATGGCAGCCCACAGGGAGAAGGCACCGTCACAGGAGAACTGCATAATGGCTGGATTGATGTCACCTGGGATGCTGGTGGCTCAAACTCTTACCGTATGGGCGCAGAAGGAAAATTTGACCTCAAGCTTGCACCAGGGTACGACCCTGATACAGTGGCATCACCCAAACCTGTTTCATCCACTGTTTCAGGCACAACGCAATCATGGAGCAGCTTGGTGAAAAACAACTGTCCAGACAAGACATCTGCTGCTGCAGGCTCCTCAAGTAGAAAAGGAAGCAGCAGTTCTGTGTGTAGCGTGGCCAGTAGCAGCGACATCAGCTTGGGTTCGACCAAAACGGAACGGAGATCAGAAATTGTAATGGAACACAGTATAGTTTCAGGAGCTGATGTCCATGAACCAATTGTTGTTCTTTCATCTGCTGAAAACGTCCCTCAAACAGAAGTAGGGTCATCTTCCAGTGCAAGTACCAGCACCTTAACAACGGAAATGGGAAGTGAAAATGCTGAAAGAAAGTTAGGCCCTGATAGTTCTGTTCGTGCTCCTGGGGAGTCTAGTGCAATATCCATGGGAATTGTTAGTGTTAGTTCTCCTGATGTTAGTTCAGTATCTGAGTTAACTAATAAAGAAGCAGCTTCACAACGGCCCCTTAGCTCTTCAGCAAGTAACAGACTGTCAGTGAGTTCTTTGTTAGCTGCTGGGGCCCCTATGAGCTCTAGTGCAAGTGTTCCTAACCTGTCCTCAAGAGAAACATCTAGCTTGGAGAGTTTTGTAAGGAGAGTGGCAAACATAGCACGGACTAATGCCACGAACAACATGAATCTAAGCCGAAGCAGCAGTGATAACAACACTAATACTTTGGGGAGGAATGTGATGAGCACAGCAACTTCTCCTCTTATGGGTGCTCAGAGTTTCCCTAATTTGACCACACCTGGTACTACATCAACAGTGACTATGTCAACATCCAGTGTCACTAGCAGCAGCAATGTAGCTACAGCAACAACAGCTTTATCAGTTGGTCAGTCATTAAGTAATACTTTGACCACCAGCCTCACATCAACCTCCAGTGAGAGTGACACAGGTCAGGAAGCAGAATATTCCTTATATGATTTCCTTGATAGCTGCCGTGCCAGTACTCTGCTAGCTGAGCTAGATGATGATGAGGACTTGCCGGAGCCAGATGAGGAAGATGATGAAAATGAAGATGACAATCAGGAGGACCAAGAATACGAGGAGGTTATGATTCTGAGACGTCCATCCCTGCAGCGTCGAGCTGGCTCCCGCTCTGATGTAACACACCATGCTGTCACCTCTCAGCTACCACAGGTCCCAGCTGGAGCGGGGAGCCGACCTATTGGGGAGCAGGAAGAAGAAGAGTATGAAACTAAAGGGGGACGCCGGAGAACATGGGATGATGATTATGTACTAAAGCGGCAGTTTTCAGCTTTGGTTCCTGCTTTTGATCCTAGACCGGGTCGTACTAATGTCCAGCAGACAACTGATCTAGAAATTCCACCCCCAGGAACACCTCATTCAGAGCTCTTGGAAGAAGTTGAATGTACTCCGTCACCTCGATTAGCCCTCACTTTGAAAGTAACAGGTCTTGGAACAACTCGTGAAGTTGAATTACCACTCACTAATTTCAGATCAACCATCTTTTACTATGTGCAGAAATTGCTTCAGTTGTCGTGTAACGGCAATGTGAAATCAGATAAACTTAGGCGTATTTGGGAGCCAACATACACAATTATGTACAGAGAAATGAAGGATTCTGACAAAGAAAAGGAAAATGGAAAAATGGGTTGTTGGTCTATAGAGCATGTGGAACAGTATCTTGGCACTGATGAATTACCAAAGAATGACTTGATAACCTACCTGCAGAAGAATGCAGACGCTGCTTTCCTGCGCCACTGGAAATTAACTGGCACTAATAAAAGTATTAGGAAAAACAGAAATTGTTCTCAGCTCATAGCTGCATATAAGGATTTTTGTGAGCATGGAACAAAGTCTGGGTTAAACCAGGGGGCCATTTCTACTCTTCAAAGTAGTGATATTCTTAATTTGACAAAAGAACAACCTCAGGCCAAAGCAGGCAATGGACAGAATTCTTGTGGAGTAGAAGATGTCCTTCAGCTTCTGCGTATTCTGTATATAGTTGCAAGTGACCCTTATTCAAGAATATCCCAAGAAGAAGGTGATGAGCAGCCTCAGTTTACTTTTCCACCAGATGAATTCACTAGCAAAAAAATCACAACAAAAATTTTGCAGCAGATTGAGGAACCATTGGCATTGGCAAGTGGGGCTCTGCCAGACTGGTGTGAACAATTAACCAGCAAGTGTCCTTTTCTAATACCATTTGAAACTAGACAGCTGTATTTCACATGTACAGCATTTGGTGCATCAAGAGCAATAGTGTGGTTACAAAACCGACGTGAGGCCACTGTGGAAAGAACAAGGACCACAAGTAGTGTAAGGCGAGATGATCCTGGAGAGTTTCGTGTTGGTCGTCTCAAGCATGAAAGAGTAAAAGTTCCACGTGGTGAATCACTGATGGAGTGGGCTGAGAATGTCATGCAAATACATGCAGATCGGAAATCAGTTCTTGAGGTTGAATTTTTAGGAGAAGAAGGAACTGGCTTGGGGCCCACATTAGAATTTTATGCTCTGGTGGCAGCAGAATTCCAGAGAACTGATTTAGGAGCTTGGCTTTGTGATGATAACTTTCCAGATGATGAATCTCGTCATGTCGATCTTGGAGGTGGATTGAAACCTCCCGGATACTATGTTCAGAGATCATGTGGACTGTTTACAGCTCCATTTCCACAAGATAGTGATGAGCTTGAAAGGATCACAAAACTCTTTCATTTCCTTGGAATTTTCTTGGCCAAATGCATTCAAGACAATAGACTTGTGGACTTACCTATTTCTAAACCTTTCTTTAAACTTATGTGTATGGGTGACATTAAAAGCAATATGAGTAAACTGATTTATGAGTCACGAGGTGATAGAGACTTACACTGTACTGAAAGTCAGTCTGAAGCCTCTACAGAAGAAGGTCATGATTCACTCTCAGTAGGAAGCTTTGAAGAGGATTCAAAATCAGAATTTATTCTAGATCCCCCCAAACCAAAACCCCCAGCTTGGTTTAATGGAATTTTAACTTGGGAAGACTTTGAACTAGTAAACCCACACAGAGCCAGATTTTTAAAAGAAATTAAAGACCTTGCTATCAAGAGGCGCCAGATTTTAAGCAACAAAGGTCTTTCTGAAGATGAGAAGAACACAAAATTACAAGAACTAGTGCTGAAGAATCCATCAGGTTCTGGGCCTCCACTTAGCATTGAGGATTTAGGTTTAAATTTCCAGTTTTGCCCTTCCTCAAGAATATATGGTTTTACAGCTGTGGATCTCAAGCCAAGTGGTGAAGATGAGATGGTAACAATGGATAATGCAGAAGAATATGTGGATTTGATGTTTGACTTTTGTATGCATATGGGTATTCAGAAACAGATGGAAGCCTTTAGAGATGGGTTTAATAAAGTTTTTCCAATGGAGAAATTAAGTTCCTTCAGCCATGAAGAAGTCCAAATGATTCTTTGTGGAAATCAGTCGCCATCCTGGGCAGCAGAGGATATTATTAATTATACTGAACCTAAGTTGGGTTATACACGTGATAGCCCAGGTTTCCTTAGGTTTGTGAGGGTTTTATGTGGCATGTCTTCAGATGAGAGGAAGGCATTCCTGCAGTTTACCACTGGTTGTTCAACTCTACCCCCAGGTGGACTGGCTAACTTGCATCCCAGGCTCACAGTTGTACGCAAGGTTGATGCCACTGATGCAAGCTACCCATCAGTGAATACATGTGTACATTATCTAAAGTTGCCGGAATACTCTTCGGAGGAGATCATGAGAGAGCGCCTGCTAGCTGCCACAATGGAGAAAGGCTTTCATCTCAACTGA

Related Sequences

bmy_17804T0 Protein

Length: 2565 aa      View alignments
>bmy_17804T0
RCPPRTFLPALCKIFLDESAPDNVLEVTARAITYYLDVSAECTRRIVGVDGAIKALCNRLVVVELNNRTSRDLAEQCVKVLELICTRESGAVFEAGGLNCVLTFIRDSGHLVHKDTLHSAMAVVSRLCGKMEPQDSSLEICVESLSSLLKHEDHQVSDGALRCFASLADRFTRRGVDPAPLAKHGLTEELLSRMAAAGGTVSGPSSACKPGRSTTGAPSTAADSKLSNQVSTIVSLLSTLCRGSPVVTHDLLRSELPDSIESALQGDERCVLDTMRLVDLLLVLLFEGRKALPKSSAGSTGRIPGLRRLDSSGERSHRQLIDCIRSKDTDALIDAIDTGAFEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNRGQRSSSLHYAACFGRPQVAKTLLRHGANPDLRDEDGKTPLDKARERGHSEVVAILQSPGDWMCPVNKGDDKKKKDTNKDEEECNEPKGDPEMAPIYLKRLLPVFAQTFQQTMLPSIRKASLALIRKMIHFCSEALLKEVCDSDVGHNLPTVLVEITATVLDQEDDDDGHLLALQIIRDLVDKGGDIFLDQLARLGVISKVSTLAGPSSDDENEEESKPEKEDEPQEDAKELQQGKPYHWRDWSIIRGRDCLYIWSDAAALELSNGSNGWFRFILDGKLATMYSSGSPEGGSDSSESRSEFLEKLQRARGQVKPSTSSQPILSAPGPTKLTVGNWSLTCLKEGEIAIHNSDGQQATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVRTMARDLYDDHFKAVESMPRGVVVTLRNIATQLESSWELHTNRQCIESENTWRDLMKTALENLIVLLKDENTISPYEMCSSGLVQALLTVLNNSMDLDMKQDCSQLVERINVFKTAFSENEDDESRPAVALIRKLIAVLESIERLPLHLYDTPGSTYNLQILTRRLRFRLERAPGETALIDRTGRMLKMEPLATVESLEQYLLKMVAKQWYDFDRSSFVFVRKLREGQNFVFRHQHDFDENGIIYWIGTNAKTAYEWVNPAAYGLVVVTSSEGRNLPYGRLEDILSRDNSALNCHSNDDKNAWFAIDLGLWVVPSAYTLRHARGYGRSALRNWVFQVSKDGQNWTSLYTHVDDCSLNEPGSTATWPLDPPKDEKQGWRHVRIKQMGKNASGQTHYLSLSGFELYGTVNGVCEDQLGKAAKEAEANLRRQRRLVRSQVLKYMVPGARVIRGLDWKWRDQDGSPQGEGTVTGELHNGWIDVTWDAGGSNSYRMGAEGKFDLKLAPGYDPDTVASPKPVSSTVSGTTQSWSSLVKNNCPDKTSAAAGSSSRKGSSSSVCSVASSSDISLGSTKTERRSEIVMEHSIVSGADVHEPIVVLSSAENVPQTEVGSSSSASTSTLTTEMGSENAERKLGPDSSVRAPGESSAISMGIVSVSSPDVSSVSELTNKEAASQRPLSSSASNRLSVSSLLAAGAPMSSSASVPNLSSRETSSLESFVRRVANIARTNATNNMNLSRSSSDNNTNTLGRNVMSTATSPLMGAQSFPNLTTPGTTSTVTMSTSSVTSSSNVATATTALSVGQSLSNTLTTSLTSTSSESDTGQEAEYSLYDFLDSCRASTLLAELDDDEDLPEPDEEDDENEDDNQEDQEYEEVMILRRPSLQRRAGSRSDVTHHAVTSQLPQVPAGAGSRPIGEQEEEEYETKGGRRRTWDDDYVLKRQFSALVPAFDPRPGRTNVQQTTDLEIPPPGTPHSELLEEVECTPSPRLALTLKVTGLGTTREVELPLTNFRSTIFYYVQKLLQLSCNGNVKSDKLRRIWEPTYTIMYREMKDSDKEKENGKMGCWSIEHVEQYLGTDELPKNDLITYLQKNADAAFLRHWKLTGTNKSIRKNRNCSQLIAAYKDFCEHGTKSGLNQGAISTLQSSDILNLTKEQPQAKAGNGQNSCGVEDVLQLLRILYIVASDPYSRISQEEGDEQPQFTFPPDEFTSKKITTKILQQIEEPLALASGALPDWCEQLTSKCPFLIPFETRQLYFTCTAFGASRAIVWLQNRREATVERTRTTSSVRRDDPGEFRVGRLKHERVKVPRGESLMEWAENVMQIHADRKSVLEVEFLGEEGTGLGPTLEFYALVAAEFQRTDLGAWLCDDNFPDDESRHVDLGGGLKPPGYYVQRSCGLFTAPFPQDSDELERITKLFHFLGIFLAKCIQDNRLVDLPISKPFFKLMCMGDIKSNMSKLIYESRGDRDLHCTESQSEASTEEGHDSLSVGSFEEDSKSEFILDPPKPKPPAWFNGILTWEDFELVNPHRARFLKEIKDLAIKRRQILSNKGLSEDEKNTKLQELVLKNPSGSGPPLSIEDLGLNFQFCPSSRIYGFTAVDLKPSGEDEMVTMDNAEEYVDLMFDFCMHMGIQKQMEAFRDGFNKVFPMEKLSSFSHEEVQMILCGNQSPSWAAEDIINYTEPKLGYTRDSPGFLRFVRVLCGMSSDERKAFLQFTTGCSTLPPGGLANLHPRLTVVRKVDATDASYPSVNTCVHYLKLPEYSSEEIMRERLLAATMEKGFHLN*