Part of scaffold_1602 (Scaffold)

For more information consult the page for scaffold_1602 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MSH3 ENSTTRG00000016443 (Bottlenosed dolphin)

Gene Details

mutS homolog 3 (E. coli)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015586, Bottlenosed dolphin)

Protein Percentage 97.34%
cDNA percentage 97.52%
Ka/Ks Ratio 0.35627 (Ka = 0.0142, Ks = 0.0398)

BT.90094 ENSBTAG00000007684 (Cow)

Gene Details

DNA mismatch repair protein Msh3

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000010107, Cow)

Protein Percentage 93.42%
cDNA percentage 94.07%
Ka/Ks Ratio 0.21249 (Ka = 0.0328, Ks = 0.1545)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1701 bp    Location:28938..154392   Strand:+
>bmy_17810
ATGGATAAMATGTGTTTTGAATACAGCCACGCTTTCCAAGAGGTTACAGAATTTTATGCAAAAGACGTAGTTGACGGTAAAGGTTCTCAAAGTTTTTCTGGCATCATTAACTTGGAAAAGCCTGTGATTTGCTCTTTGGCTGCCATAATAAGATACCTGAAAGAGTTTAACTTGGAAAAGGTGCTTTCCAAACCCAAGAATTTTAAACAGTTGTCAGGTGAAATGGAATTTATGACAATTAATGGAACAACATTAAGGAACCTGGAAATCCTTCAGAATCAGGTCAGGGAGATAAATGCTCGACTTGATGCTGTATCTGAAGTTCTCCATTCAGAATCCAGTGTGTTTGGCCAGATAGAAAATCATCTACGTAAATTGCCTGACATCGAAAGAGGACTCTGTAGCATTTATCACAAAAAATGTTCTACGCAAGAGTTCTTCCTGATTGTCAAAACCCTGTATCACCTGAAGTCAGAATTTCAAGCACTAATACCTGCTGTTAATTTCCATGTTCAGTCAGAGTTGCTCCAGACGTTTATTTCAGAAATTCCTGAACTCCTCAGTCCAGTGGAGCATTACTTAAAGATTCTCAACGAACAAGCTGCCAACACAAAAGCTGTGAGCCGCTTTCACTCTCCTTTTATTGTAGAAAATTACAGACATCTGAATCAGCTCCGGGAGCAGCTAGTCCTTGACTGCAGCGCTGAATGGCTTGATTTTCTAGAGAATTTCAGTGAACATTATCACTCCTTGTGTAAAGCAGTACATCACCTAGCAACTGTTGACTGCATTTTCTCCCTGGCCAAGGTCGCTAAGCAAGGAGATTACTGCAGACCAACTCTACAAGAAGAAAGGAAAATCATAATAAAAAATGGCCGGCACCCTGTGATTGATGTGCTGCTGGGAGAACAGGACCAGTATGTTCCCAATAGTACAAATTTGTTGGGGGACTCAGAGAGAGTAATGATAATTACTGGACCAAACATGGGTGGAAAGAGCTCCTACATAAAGCAAGTTGCATTGATTACTATCATGGCTCAGATTGGCTCCTATGTTCCGGCAGAGGAAGCAACAATTGGAATTGTGGATGGCATTTTCACAAGGATGGGGGCTGCGGATAACATATATAAAGGACAGAGTACATTTATGGAAGAACTGGCTGACACAGCAGAAATAATAAGAAAAGCAACATCACAGTCTTTGGTTATCTTGGATGAATTGGGAAGAGGGACAAGCACCCATGATGGAATCGCCATTGCTTATGCTACACTTGAGCATTTTATTAGAGACGTGAAATCCTTAACCCTCTTTGTTACCCATTATCCACCAGTCTGTGAATTAGAAAAAAGTTACTCACAACAGGTGGGGAATTATCACATGGGATTCTTGGTCAATGAGGATGAAAGCAAACAGGACCCAGGTGAAGAAGACCAGGTTCCTGATTTTGTCACTTTTCTTTATCAAATAACCAGAGGAGTTGCAGCAAGGAGTTATGGACTCAATGTGGCTAAACTAGCAGATGTTCCTGGAGAAATTTTAAAGAAAGCAGCTAGCAAATCAAAAGAGCTGGAAGGATTAGTAAATATGAAAAGGAAAAGGCTAAAGTGTTTTGCGAAGTTATGGACGATAAATGATGCAAATGATTTGCAAAAGTGGATGGATGAATTCAAACTGGAAGAAATTACAGACTTCTCTTCCTGA

Related Sequences

bmy_17810T0 Protein

Length: 567 aa      View alignments
>bmy_17810T0
MDXMCFEYSHAFQEVTEFYAKDVVDGKGSQSFSGIINLEKPVICSLAAIIRYLKEFNLEKVLSKPKNFKQLSGEMEFMTINGTTLRNLEILQNQVREINARLDAVSEVLHSESSVFGQIENHLRKLPDIERGLCSIYHKKCSTQEFFLIVKTLYHLKSEFQALIPAVNFHVQSELLQTFISEIPELLSPVEHYLKILNEQAANTKAVSRFHSPFIVENYRHLNQLREQLVLDCSAEWLDFLENFSEHYHSLCKAVHHLATVDCIFSLAKVAKQGDYCRPTLQEERKIIIKNGRHPVIDVLLGEQDQYVPNSTNLLGDSERVMIITGPNMGGKSSYIKQVALITIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGQSTFMEELADTAEIIRKATSQSLVILDELGRGTSTHDGIAIAYATLEHFIRDVKSLTLFVTHYPPVCELEKSYSQQVGNYHMGFLVNEDESKQDPGEEDQVPDFVTFLYQITRGVAARSYGLNVAKLADVPGEILKKAASKSKELEGLVNMKRKRLKCFAKLWTINDANDLQKWMDEFKLEEITDFSS*