Sequence details bmy_17841 (Coding sequence)

Part of scaffold_1609 (Scaffold)

For more information consult the page for scaffold_1609 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SECISBP2L ENSTTRG00000009412 (Bottlenosed dolphin)

Gene Details

SECIS binding protein 2-like

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008926, Bottlenosed dolphin)

Protein Percentage 98.86%
cDNA percentage 99.21%
Ka/Ks Ratio 0.32419 (Ka = 0.0048, Ks = 0.0149)

SECISBP2L ENSBTAG00000046553 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000055066, Cow)

Protein Percentage 55.01%
cDNA percentage 63.46%
Ka/Ks Ratio 0.41652 (Ka = 0.4324, Ks = 1.0381)

SECISBP2L  (Minke Whale)

Gene Details

SECIS binding protein 2-like

External Links

Gene match (Identifier: BACU003219, Minke Whale)

Protein Percentage 98.98%
cDNA percentage 98.98%
Ka/Ks Ratio 0.31458 (Ka = 0.0063, Ks = 0.02)

Additional orthologs identified in other species via the OPTIC pipeline.

SECISBP2L (Human)   Secisbp2l (Mouse)  

Genome Location

Sequence Coding sequence

Length: 3150 bp    Location:246025..308032   Strand:+
Raw sequence 
>bmy_17841
ATGGACCGAGCCCCCGCAGACCAGAATGTCAAGCTGTCAGCTGAGGTAGAACCATTTATTCCCCAGAAGAAGAGTCCTGATACATTTATGATCCCTATGGCACTCCCAAATGATAACGGCAGTGTTTCTGGTGTAGAACCAACTCCAATTCCCAGCTACCTGATTACTTGTTATCCATTTGTTCAGGAAAACCAGTCCAATAGACAGTTTCCATTATATAACAATGATATACGATGGCAACAGCCTAATCCAAACCCTGCTGGACCATACCTTGCTTACCCCATTATATCTGCTCAGCCACCTGTTTCTACAGAGTATACATATTATCAGCTGATGCCAGCACCATGTGCCCAAGTTATGGGTTTCTATCATCCTTTTCCTGCACCTTACTCCAACACTTTTCAGGCTGCAAATACTGTCAATACTATAACCGCAGAATGCACTGAGCGTCCAAATCAGCTTGGACAGGTCTTCCCGTTATCTGGTCATCGAAACAGAAACAGTAATAGAGGACCAGTGGTACCAAAACAACAGCTTTTACAACAGCACATAAAAAGCAAAAGGCCACTGGTGAAAAATGTAGCCACTCAGAAAGAGACAAATGCAGCAGATTTCCCATCAGACATCGCTAACAAATCTCTCTCAGAGAGCTCTGCCACGATGGTCTGGAAGGCCAAAGGCAGGAGGAGAAGAGCGTCCCACCCTACTGCTGAATCCTCTAGTGAGCAGGGGGCTAGTGAAGCTGACATTGACAGTGATAGTGGCTACTGCAGTCCCAAACACAGCAACAACCAACCTGCAGCTGGGGCTTTGAGAAATCCTGATTCTAGCACCATCAGTCATGTGGAATCATCTATATGTGCAGGTGGTGTAAATTGGTCCAATGTAACTTGCCAGGCAACTCAGAAAAAACCTTGGATGGAAAAAAATCAGACATTTTCTAGAGGTGGAAGGCAGGCTGAACAAAGAAATAATTCACAGAGACAAGATAATAAGCAGTTAAACCCCAGTCAATGTCATAGAGGCGACCCAAATTCCGAGTCTTTATATTTTGAGGATGAAGATGGATTTCGAGAACTAAATGAGAATGGAAGTGCTAAAGATGAGAATATTCAACAGAAACTTTCTCCAAAAGTAACACCAATTCCCATTACAACCTCAGTTCCTAAACGTGCAAAAAGTCAAAAGAAGAAAGCTTTAGCAGCAGCCCTTGCCACAGCTCAAGAATATTCAGAAATAAGTATGGAGCAAAAAAAACTACAGGAAGCTTTATCAAAGGCAGCTGGGAAAAAGAATAAAACACCTGTACAACTAGATTTGGGGGACATGTTAGCAGCTCTGGAAAAACAACAACAAGCCATGAAAGCGCGGCAAATTACTAATACCAGACCTCTGTCATATACAGTGGTCACTGCAGCTTCTTTTCACACTAAAGACTCTACTAACAGAAAACCCTTAACCAAAGGTCAGCCCTGTTTGACATCCTTTAATTCTTTGGACATTACTTCCTCTAAAGCAAAAAAAGGAAAAGAAAAGGAAATTGCAAAACTAAAACGGCCCACAGCACTTAAAAAGGTTATTTTGAAAGAAAGAGAGGAAAAGAAGGGCCGTTTAACTGTGGACCACAATCTTTTGGGATCTGAGGAACCAATAGAAATGCACTTAGATTTTATTGATGATTTGCCGCAGGAGATTGTTTCCCAAGAAGATGCTGGACTGAGCATGCCCAGTGATGCATCCCTCTCTCCAGCAAGTCAGAACTCTCCGTACTGTATGACACCTGTGTCACAAGGCTCTCCGGCTAGTTCTGGGATAGGCAGTCCAATGGCATCTTCGACAATAACCAAAATCCACAGCAAAAGATTTAGAGAGTACTGTAATCAGGTTCTTTGTAAAGAGATTGATGAATGTGTGACTCTTCTTCTTCAAGAGCTYGTCAGCTTCCAGGAACGCATCTACCAAAAGGATCCTGTAAGAGCAAAAGCGAGGAGACGGCTGGTCATGGGTCTAAGAGAGGTTACGAAACATATGAAGTTAAACAAGATCAAATGTGTTATAATTTCTCCAAATTGTGAAAAAATCCAGTCCAAAGGTGGCCTGGATGAGGCTCTCTATAATGTTATAGCCATGGCACGGGAACAAGAAATTCCTTTTGTGTTTGCCCTTGGAAGAAAAGCTCTAGGACGCTGTGTGAACAAGCTGGTTCCTGTTAGTGTGGTAGGAATCTTCAACTACTTTGGTGCTGAGAGCCTGTTTAATAAGTTAGTAGAACTCACTGAAGAAGCCAGGAAAGCATATAAAGATATGGTTGCAGCAATGGAACAGGAGCAAGCCGAGGAAGCCTTGAAGAACGTGAAAAAGGTGCCACACCACATGGGGCATTCTCGGAATCCCTCTGCAGCAAGCGCCATTTCTTTCTGCAGTGTTATTTCTGAACCCATCTCTGAAGTAAATGAAAAGGAGTATGAAACAAATTGGAGAAACATGGTGGAAACTTCGGATGCATTGGAAACATCAGAAAATGAGAGAGAAGTTTCTTGTAAGCACAGCACATCTGAAAAACCCAGTAAACTTCCATTTGACACAGCCCCTGTTGGTAAGCAGCCATCATCAGTGGCTGCAGGCAGTACTACCTCAGCTACAAACCCTGGAAAATCAACAGTGAGTGATAAAGAGGAAGTGAAGCCAGATGACCTGGAATGGGCCTCACAGCAGAGTACAGAGACCGGCTCTTTGGATGGCAGTGGCCGGGATCTTTTGAATTCCTCCATCACCAGCACCACCAGCACTCTTGTACCTGGCATGCTGGAAGAAGAGGATGATGAAGAKGAGGAGGAGGAGGAAGATTATACTCATGAACCCATATCTGTAGAAGTGCAGCTCAATAGTAGAATTGAGTCTTGGGTCTCTGAGACTCAGAGAACGATGGAAACTCTTCAGCTTGGAAAAACCCTTAATGGTTCTGAGGAAGACAATGCAGAGCAAAGTGGGGAAGAGGAAGCAGAGGCTGCTGAGGTGCTAGAGCCAGGGATGGATAGCGAGGCCTGGACTACTGACCATCAAGCAAGTCAGGAACAGCAGAAGCCCAGCAACTGCAGCTCGCTGAACAAGGAGCACTCTGATTCTAATTATACGCCCCCAAATCTATAA

Related Sequences

bmy_17841T0 Protein

Length: 1050 aa      View alignments
>bmy_17841T0
MDRAPADQNVKLSAEVEPFIPQKKSPDTFMIPMALPNDNGSVSGVEPTPIPSYLITCYPFVQENQSNRQFPLYNNDIRWQQPNPNPAGPYLAYPIISAQPPVSTEYTYYQLMPAPCAQVMGFYHPFPAPYSNTFQAANTVNTITAECTERPNQLGQVFPLSGHRNRNSNRGPVVPKQQLLQQHIKSKRPLVKNVATQKETNAADFPSDIANKSLSESSATMVWKAKGRRRRASHPTAESSSEQGASEADIDSDSGYCSPKHSNNQPAAGALRNPDSSTISHVESSICAGGVNWSNVTCQATQKKPWMEKNQTFSRGGRQAEQRNNSQRQDNKQLNPSQCHRGDPNSESLYFEDEDGFRELNENGSAKDENIQQKLSPKVTPIPITTSVPKRAKSQKKKALAAALATAQEYSEISMEQKKLQEALSKAAGKKNKTPVQLDLGDMLAALEKQQQAMKARQITNTRPLSYTVVTAASFHTKDSTNRKPLTKGQPCLTSFNSLDITSSKAKKGKEKEIAKLKRPTALKKVILKEREEKKGRLTVDHNLLGSEEPIEMHLDFIDDLPQEIVSQEDAGLSMPSDASLSPASQNSPYCMTPVSQGSPASSGIGSPMASSTITKIHSKRFREYCNQVLCKEIDECVTLLLQELVSFQERIYQKDPVRAKARRRLVMGLREVTKHMKLNKIKCVIISPNCEKIQSKGGLDEALYNVIAMAREQEIPFVFALGRKALGRCVNKLVPVSVVGIFNYFGAESLFNKLVELTEEARKAYKDMVAAMEQEQAEEALKNVKKVPHHMGHSRNPSAASAISFCSVISEPISEVNEKEYETNWRNMVETSDALETSENEREVSCKHSTSEKPSKLPFDTAPVGKQPSSVAAGSTTSATNPGKSTVSDKEEVKPDDLEWASQQSTETGSLDGSGRDLLNSSITSTTSTLVPGMLEEEDDEXEEEEEDYTHEPISVEVQLNSRIESWVSETQRTMETLQLGKTLNGSEEDNAEQSGEEEAEAAEVLEPGMDSEAWTTDHQASQEQQKPSNCSSLNKEHSDSNYTPPNL*