Part of scaffold_1609 (Scaffold)

For more information consult the page for scaffold_1609 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SHC4 ENSTTRG00000009394 (Bottlenosed dolphin)

Gene Details

SHC (Src homology 2 domain containing) family, member 4

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008903, Bottlenosed dolphin)

Protein Percentage 73.54%
cDNA percentage 76.86%
Ka/Ks Ratio 0.49503 (Ka = 0.1901, Ks = 0.384)

SHC4 ENSBTAG00000022583 (Cow)

Gene Details

SHC-transforming protein 4

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000015489, Cow)

Protein Percentage 96.48%
cDNA percentage 95.54%
Ka/Ks Ratio 0.11797 (Ka = 0.0163, Ks = 0.1384)

SHC4  (Minke Whale)

Gene Details

SHC (Src homology 2 domain containing) family, member 4

External Links

Gene match (Identifier: BACU003221, Minke Whale)

Protein Percentage 76.94%
cDNA percentage 80.18%
Ka/Ks Ratio 0.53511 (Ka = 0.192, Ks = 0.3589)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1239 bp    Location:414215..466160   Strand:+
>bmy_17843
ATGGCTCCCGGCTCCCGCCGCCTACCTCCATCTGCGGAAGGTCACTCTCGCCAGGCATCACATCCATCTGCAGGTCATTGCTTTCCTCATAAAGCTCGGACAGCTCGTTCATTTCAGACATTGTGCAAACGGCTCAACCTCCCCGCAAGGCGTTTTCGGCAAGATCGGAGCTACGCGGCCGTGCGGTTGTGCGCTTGCGCAAGCACCGTGCGCTTGCGTGACCTTGTGCGTGTGCGCGACCCTCCCAGACACCGCCTACCCCTCGGAGCGCTGTTTGGGGGCCGGCAGCTCGCAGTTCCACCCTGGSAATGTTCCCGGGGCCCGCTGGTTGGCTCTTCGTGCGTTCGAACTTCAGACCTAGATGCTATTATTGCAAATCATCATATGCAGTCTATTTCATTTGCTTCTGGAGGGGATCCGGATACTACAGACTATGTTGCCTACGTAGCTAAAGATCCAGTTAATCAACGAGCCTGCCACATATTGGAATGCAGCAATGGAATGGCCCAAGACGTCATAAGTACCATAGGGCAGGCTTTTGAACTCCGGTTTAAACAGTATTTGAAAAATCCTTCTTTGAATACTTCTTCTGAAAGTGAGGAAGTGCACGTTGATGACCATGCTGAGGAGAGAGAAGATCATGAGTATTACAATGAAATCCCGGGCAAGCAGCCGCCTGCAGGTGGTGTTTCAGATGTACGGATCAAAGTTCAAGCCACAGAACAAATGGCTTACTGCCCCATACGGTGTGAAAAGTTGTGCTATTTGCCGGGAAACTCCAAGTGCAGCAGTGTGTATGAGAACTGTCTAGAACAAAGCAGGGCAATAGAGGCACCAGAAACTGTTCAGCCAGGTGCCACGGCCCAGCCTGCCAGCTCACATTCTTTGCCACACATTAAGCAGCAGCTGCGGAATGAAGACTGCTACCATGGCAAGCTGAGCAGGAAAGCAGCAGAGAGCCTCTTGGTAAAGGATGGGGACTTTTTGGTTCGAGAGAGTGCAACATCTCCTGGCCAATATGTGCTGAGTGGGCTACAGGGAGGCCAGGCAAAACATCTTCTCCTGGTGGATCCCGAAGGCAAGGTGAGGACCAAGGATCATGTATTTGATAATGTTGGCCACCTTATCAGATACCACATGGATAATAGTTTGCCAATCATCTCTTCTGGAAGCGAAGTAAGCCTTAAACAACCAGTGAGAAAAGATAATAATCCAGTACTTTTGCATTCCAACAAATGA

Related Sequences

bmy_17843T0 Protein

Length: 413 aa      View alignments
>bmy_17843T0
MAPGSRRLPPSAEGHSRQASHPSAGHCFPHKARTARSFQTLCKRLNLPARRFRQDRSYAAVRLCACASTVRLRDLVRVRDPPRHRLPLGALFGGRQLAVPPWZCSRGPLVGSSCVRTSDLDAIIANHHMQSISFASGGDPDTTDYVAYVAKDPVNQRACHILECSNGMAQDVISTIGQAFELRFKQYLKNPSLNTSSESEEVHVDDHAEEREDHEYYNEIPGKQPPAGGVSDVRIKVQATEQMAYCPIRCEKLCYLPGNSKCSSVYENCLEQSRAIEAPETVQPGATAQPASSHSLPHIKQQLRNEDCYHGKLSRKAAESLLVKDGDFLVRESATSPGQYVLSGLQGGQAKHLLLVDPEGKVRTKDHVFDNVGHLIRYHMDNSLPIISSGSEVSLKQPVRKDNNPVLLHSNK*