Sequence details bmy_17858 (Coding sequence)

Part of scaffold_1624 (Scaffold)

For more information consult the page for scaffold_1624 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CHIC2 ENSTTRG00000011486 (Bottlenosed dolphin)

Gene Details

cysteine-rich hydrophobic domain 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010893, Bottlenosed dolphin)

Protein Percentage 98.53%
cDNA percentage 99.02%
Ka/Ks Ratio 99.0 (Ka = 0.0107, Ks = 0.0001)

CHIC2 ENSBTAG00000032660 (Cow)

Gene Details

cysteine-rich hydrophobic domain 2 protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000031059, Cow)

Protein Percentage 100.0%
cDNA percentage 98.54%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0338)

CHIC2  (Minke Whale)

Gene Details

cysteine-rich hydrophobic domain 2

External Links

Gene match (Identifier: BACU002233, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.76%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0151)

Additional orthologs identified in other species via the OPTIC pipeline.

CHIC2 (Human)  

Genome Location

Sequence Coding sequence

Length: 414 bp    Location:163172..208854   Strand:+
Raw sequence 
>bmy_17858
ATGGCGGATTTCGACGAGATCTATGAGGAGGAGGAGGACGAGGAGCGGGCCTTGGAGGAGCARCTGCTCAAGTACTCGCCGGACCCGGTGGTGGTCCGCGGCTCCGGTCACGTCACCGTATTTGGACTGAGCAACAAATTTGAATCAGAATTCCCTTCTTCATTAACTGGAAAAGTAGCTCCTGAAGAATTTAAAGCCAGCATCAACAGAGTTAACAGTTGTCTTAAGAAGAACCTTCCTGTTAATACACGAAGATCGATTGAGAAGTTATTAGAATGGGAAAACAATAGGTTATACCACAAGCTGTGCTTGCACTGGAGACTGAGCAAAAGGAAATGTGAAACGAATAACATGATGGAATATGTCATCCTCATAGAATTTTTACCAAAGACACCGATTTTTCGACCAGATTAG

Related Sequences

bmy_17858T0 Protein

Length: 138 aa      View alignments
>bmy_17858T0
MADFDEIYEEEEDEERALEEQLLKYSPDPVVVRGSGHVTVFGLSNKFESEFPSSLTGKVAPEEFKASINRVNSCLKKNLPVNTRRSIEKLLEWENNRLYHKLCLHWRLSKRKCETNNMMEYVILIEFLPKTPIFRPD*