Part of scaffold_1608 (Scaffold)

For more information consult the page for scaffold_1608 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SLC35A1 ENSTTRG00000008929 (Bottlenosed dolphin)

Gene Details

solute carrier family 35 (CMP-sialic acid transporter), member A1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008470, Bottlenosed dolphin)

Protein Percentage 81.12%
cDNA percentage 80.59%
Ka/Ks Ratio 0.04654 (Ka = 0.0024, Ks = 0.052)

SLC35A1 ENSBTAG00000014057 (Cow)

Gene Details

CMP-sialic acid transporter

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000018680, Cow)

Protein Percentage 95.98%
cDNA percentage 94.11%
Ka/Ks Ratio 0.16714 (Ka = 0.0263, Ks = 0.1572)

SLC35A1  (Minke Whale)

Gene Details

solute carrier family 35 (CMP-sialic acid transporter), member A1

External Links

Gene match (Identifier: BACU016923, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.33%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0241)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 750 bp    Location:348429..360790   Strand:+
>bmy_17871
ATGAAGTTGAGCGTGCCTTCCTTAGTGTATGCTGTGCAGAACAACATGGCTTTCCTGGCTCTTAGCAATCTGGATGCAGCAGTGTACCAGGTGACGTACCAGTTGAAGATTCCTTGTACTGCTCTATGTACTGTTTTAATGTTAAACAGGACGCTCAGCAGGTTACAGTGGATTTCAGTTTTTATGCTGTGTGGAGGAGTCGTCCTCGTACAGTGGAGACCAGCCCAGGCCACGGGAGTCGTGGTGGAACAGAATCCATTATTAGGGTTTGGTGCTATAGCTGTTGCTGTATTGTGCTCAGGATTTGCAGGAGTGTATTTTGAAAAAGTTTTAAAGAGTTCAGACACTTCCCTTTGGGTGAGAAACATTCAAATGTATCTATCAGGGATTGTTGTGACATTAGTTGGCGTCTACTTGTCAGATGGAGCTGAAATTAAAGAAAAAGGATTTTTCTATGGTTACACATATTATGTCTGGCTTGTCATCTTTCTTGCTAGTGTTGGAGGCCTCTACACTTCTGTTGTGGTCAAGTACACAGACAACATCATGAAAGGCTTTTCTGCAGCAGCAGCCATTGTCCTTTCTACCATTGCTTCAGTGATGCTGTTTGGATTACAGATAACACTCACCTTTGCTCTGGGTACTCTTCTTGTATGTGTTTCTATATATCTCTATGGATTACCCAGACAAGACACGACATCCATCCAACAAGGAGAACCAACTTCAAAAGAGAGAGTCGGTGGTGTGTGA

Related Sequences

bmy_17871T0 Protein

Length: 250 aa      View alignments
>bmy_17871T0
MKLSVPSLVYAVQNNMAFLALSNLDAAVYQVTYQLKIPCTALCTVLMLNRTLSRLQWISVFMLCGGVVLVQWRPAQATGVVVEQNPLLGFGAIAVAVLCSGFAGVYFEKVLKSSDTSLWVRNIQMYLSGIVVTLVGVYLSDGAEIKEKGFFYGYTYYVWLVIFLASVGGLYTSVVVKYTDNIMKGFSAAAAIVLSTIASVMLFGLQITLTFALGTLLVCVSIYLYGLPRQDTTSIQQGEPTSKERVGGV*