Sequence detailsbmy_17872 (Coding sequence)

Part of scaffold_1608 (SequenceType object (1))

For more information consult the page for scaffold_1608 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RARS2ENSTTRG00000008930 (Bottlenosed dolphin)

Gene Details

arginyl-tRNA synthetase 2, mitochondrial

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000008471, Bottlenosed dolphin)

Protein Percentage 93.87%
cDNA percentage 94.33%
Ka/Ks Ratio 0.37104 (Ka = 0.0213, Ks = 0.0575)

RARS2ENSBTAG00000016967 (Cow)

Gene Details

Probable arginine--tRNA ligase, mitochondrial

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000022568, Cow)

Protein Percentage 94.38%
cDNA percentage 93.7%
Ka/Ks Ratio 0.18179 (Ka = 0.0312, Ks = 0.1715)

RARS2 (Minke Whale)

Gene Details

arginyl-tRNA synthetase 2, mitochondrial

External Links

Gene match (Identifier: BACU019512, Minke Whale)

Protein Percentage 98.56%
cDNA percentage 99.18%
Ka/Ks Ratio 0.89044 (Ka = 0.0081, Ks = 0.0091)

Genome Location

Sequence SequenceType object (2)

Length: 1986 bp    Location:411320..364663   Strand:-
Raw sequence 
>bmy_17872
ATGTCTGTCTTTAGAGAAGTAGCTGACTTTCAGCTTTCTGTGGATTCTCTATTGGAACACAACAATGGCCATTCAAGACCAGATATTCAACTTCAAGCCATGAGACTGGCAGAGAAGCTAAAATGTGACACGGTGGTGAGTGAAATCAGCACTGGTCCAGGGACTACAGTACTACAAGAAGTGATTGAAGATGGCTCAAAATATGGATTAAAAAGTGAACTGTTTTCTGGCCTTCCCCAGAAGAAGATCGTGGTTGAATTCAGTTCACCTAATGTTGCCAAAAAATTTCATGTTGGACATTTGCGTTCTACCATCATAGGAAACTTTATAGCAAATCTCAAAGAAGCTTTAGGACATCAAGTAACAAGAATAAATTATCTTGGAGATTGGGGCATGCAATTTGGTCTTTTGGGAACTGGCTTCCAGCTGTTTGGCTATGAAGAAAAACTCCAGTCCAATCCTTTACAGCATCTCTTTGAAGTTTATGTACAAGTTAATAAAGAAGCAGCAGACGATAAAAATGTAGCAAAATCAGCACATGAGTTCTTCCAGCGATTGGAACTGGGCGACACGCAAGCACTTGCACTCTGGCAGAAATTTCGGGACTTGAGCATAGAAGAGTACATTCGGATTTACAAGCGTCTAGGAGTACACTTTGATGAATATTCAGGAGAATCATTTTATCGTGAAAAATCTCAAGAAGTCTTAAAGTTGCTGGACAGTAAAGGACTCCTACAGAAAACAATGTATGATCAGGTTACTATTCTTGAGAAAGTTATTCATTCTGCTTTGAAGGGTCCTCCAAGCCACCTCCAGCAGAATTACCGGAACAGCGAGAGTGGGGAAAAGACGGAGGGATCCGAGAGTGCCCCCGAAGGCCAGGCCCGACAGCGCCGGCCCTACTGCAGGCGCAGGCGCCCACCTTACTGCGTGCGGAGAGCCAATGGGCGTCGACCACAGCGTTCCACCCTCCTGTGCGGGGAGAGGGGCCCTCCTCGCCAAAGACAGCGCAGAGAGGACGGCAGTGAAGAAGATAAGGAAAATCAAGGAGATGAGACCCAAGAGTTACCTTTTTGCATTTCTAGAAAAGGCACAGCTGTAGTGGATCTGTCAGGGAATGGTGACCCCTCCTCAATTTGTACTGTAATGCGAAGCGATGGGACGTCTCTCTATGCAACCAGAGATCTTGCAGCTGCTATAGATCGAATGGACAAGTATAATTTTGATAAAATGATTTATGTGACAGATAAAGGGCAAAAAAAGCATTTTCAGCAAGTGTTCCAAATGCTGCAGACCATGGGATATGACTGGGCAGAAAGGTGCCAGCACGTGCCCTTTGGGGTAGTGCAGGGAATGAAGACGCGAAGAGGAGACGTTACTTTTCTGGAAGATGTTCTAAATGAGATTCGATTGAGGATGCTACAGAACATGGCTTCTATTAAGACTACCAGAGAGCTGGAGAACCCCCAGGAGACAGCAGAGAGAGTGGGGCTCGCAGCCCTCATCATTCAGGACTTCAGAGGTTTCCTGTTATCTGACTATCAGTTCAGCTGGGATCGTGTTTTCCAGAGTCGCGGGGACACGGGAGTCTTCCTGCAGTACACACACGCCCGCCTCCACAGTTTGGAAGAGACTTTTGGATGCGGTTATCTAAATGACTTCAACACTGCTTGCTTACAAGAGCCACAGTCTGTTTCCATTCTCCAGCATCTTCTCAGGTTCGATGAGGTGCTTTATAGGTCAGCCCAAGACCTTCAACCCAGGCACATTGTCAGTTACCTTCTAACTCTAAGTCATCTTGCAGCGGTGGCACACAAAACACTACACATAAAAAGCAGTCCTCCTGAAGTGGCCGGGCATCCTGTTGTTCAACTACAGCAGTGTACTTATACACTCAAGGCCAGACTTCATCTTTTCAGAGCTGTCCGCTCAGTCCTAGCCAACGGAATGAAACTTCTTGGAATAACACCTGTATGTAGGATGTAA

Related Sequences

bmy_17872T0 SequenceType object (3)

Length: 662 aa      View alignments
>bmy_17872T0
MSVFREVADFQLSVDSLLEHNNGHSRPDIQLQAMRLAEKLKCDTVVSEISTGPGTTVLQEVIEDGSKYGLKSELFSGLPQKKIVVEFSSPNVAKKFHVGHLRSTIIGNFIANLKEALGHQVTRINYLGDWGMQFGLLGTGFQLFGYEEKLQSNPLQHLFEVYVQVNKEAADDKNVAKSAHEFFQRLELGDTQALALWQKFRDLSIEEYIRIYKRLGVHFDEYSGESFYREKSQEVLKLLDSKGLLQKTMYDQVTILEKVIHSALKGPPSHLQQNYRNSESGEKTEGSESAPEGQARQRRPYCRRRRPPYCVRRANGRRPQRSTLLCGERGPPRQRQRREDGSEEDKENQGDETQELPFCISRKGTAVVDLSGNGDPSSICTVMRSDGTSLYATRDLAAAIDRMDKYNFDKMIYVTDKGQKKHFQQVFQMLQTMGYDWAERCQHVPFGVVQGMKTRRGDVTFLEDVLNEIRLRMLQNMASIKTTRELENPQETAERVGLAALIIQDFRGFLLSDYQFSWDRVFQSRGDTGVFLQYTHARLHSLEETFGCGYLNDFNTACLQEPQSVSILQHLLRFDEVLYRSAQDLQPRHIVSYLLTLSHLAAVAHKTLHIKSSPPEVAGHPVVQLQQCTYTLKARLHLFRAVRSVLANGMKLLGITPVCRM*