Sequence details bmy_17880 (Coding sequence)

Part of scaffold_1620 (Scaffold)

For more information consult the page for scaffold_1620 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

FGFR1OP ENSTTRG00000005995 (Bottlenosed dolphin)

Gene Details

FGFR1 oncogene partner

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005661, Bottlenosed dolphin)

Protein Percentage 85.05%
cDNA percentage 87.19%
Ka/Ks Ratio 0.49153 (Ka = 0.118, Ks = 0.2401)

BT.24497 ENSBTAG00000014495 (Cow)

Gene Details

FGFR1 oncogene partner

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000019271, Cow)

Protein Percentage 88.48%
cDNA percentage 88.18%
Ka/Ks Ratio 0.17149 (Ka = 0.0654, Ks = 0.3815)

Additional orthologs identified in other species via the OPTIC pipeline.

FGFR1OP (Human)   Fgfr1op (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1212 bp    Location:189982..187530   Strand:-
Raw sequence 
>bmy_17880
ATGGCGGCGGCGGCGGCCGCGGTGGTGGCGGAGGAGGACACGGAGCTGCGGGACCTGCTGGTGCAGACGCTTGAGAACACCGGGGTCGCATCAAGGCTGAACTCCGAGCAGCTGTCGCTAGAGGAGCAAGAAAAAGTAGAGAACAAAACTCCTTTAGTCAATGAGAGCCTGAAAAAGTTTTTAAATACGAAAGATGGCCGGCTGGTGGCTAGTCTCGTTGCCGAATTTCTTCAGTTTTTCAATCTTGACTTTACCTTGGCTGTTTTTCAACCTGAAACTAGCACATTTCAAGGTCTCGAAGGTCGAGAGAATTTAGCCCGAGATTTAGGAATTATTGAAGCAGAAGGTACGGTGGGTGGACCCTTATTATTAGAAGTGATCAGACGCTGTCAACAGAAAGAAAAAGGGCCAACCAGTGGGGAAGGTGCACTAGATCTGTCTGATGTACGTCCTCCACCAAAGTCCCCAGAAGGAAAAACAAGTGCACACAGTCTCCCCAGTAAGAAGGCCAGCAATGATGCTAGTCAGAGTGATACCAGTATCTCATCATCAGAACCAAAGAGCAAAAGTAGTCTTCACTTACTGGCCCATGAAACAAAAATTGGATCCTTGTTAAGCAACAAAAGTCTAGATGTCAAAGACAAAGCTGGTCCTTGTCCAGATGAAGATGATATGGAAGGAGATTCTTTCTTTGATGATCCCATTCCTAAACCAGAAAAAACCTATGAAGTGAACCTAGTAAGCAATGGAGTCAGCTCCCTTACTGGAGCTCCCTCATTGAAAGACTCTGAAAGTAAAAGGGGAAACACAATTTTGAAAGATCTTAAATTGGTCAATGATAAAATTGGATCACTTGGTTTGGGGACTGGAGAAGAAGATGACTATGTTGATGATTTTAATAGTACCAGCCATCGCTCAGAAAAAAGTGAGCTAAGTATTGGTGAAGAGATCGAGGAAGACCTCTCTGTGGAAATAGATGACGTCAATACCAGTGATAAACTTGATGACCTGACACAGGACCTCACTGTGTCCCAGCTCAGTGATGTTGCGGATTATCTGGAAGATGTTGCTGACATCACTGATCCTGAAGTATTAAAAAGAACAATTGGAAGTGGTGCGTGCATGTTCATATTGATTCTAAATATTACAGAAATATTTACTAGGCTCCGAAATGTAAAGGGAAATGATAATGTATGGATCAAGGTTATGTGA

Related Sequences

bmy_17880T0 Protein

Length: 404 aa      View alignments
>bmy_17880T0
MAAAAAAVVAEEDTELRDLLVQTLENTGVASRLNSEQLSLEEQEKVENKTPLVNESLKKFLNTKDGRLVASLVAEFLQFFNLDFTLAVFQPETSTFQGLEGRENLARDLGIIEAEGTVGGPLLLEVIRRCQQKEKGPTSGEGALDLSDVRPPPKSPEGKTSAHSLPSKKASNDASQSDTSISSSEPKSKSSLHLLAHETKIGSLLSNKSLDVKDKAGPCPDEDDMEGDSFFDDPIPKPEKTYEVNLVSNGVSSLTGAPSLKDSESKRGNTILKDLKLVNDKIGSLGLGTGEEDDYVDDFNSTSHRSEKSELSIGEEIEEDLSVEIDDVNTSDKLDDLTQDLTVSQLSDVADYLEDVADITDPEVLKRTIGSGACMFILILNITEIFTRLRNVKGNDNVWIKVM*