Sequence detailsbmy_17880 (Coding sequence)

Part of scaffold_1620 (SequenceType object (1))

For more information consult the page for scaffold_1620 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

FGFR1OPENSTTRG00000005995 (Bottlenosed dolphin)

Gene Details

FGFR1 oncogene partner

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000005661, Bottlenosed dolphin)

Protein Percentage 85.05%
cDNA percentage 87.19%
Ka/Ks Ratio 0.49153 (Ka = 0.118, Ks = 0.2401)

BT.24497ENSBTAG00000014495 (Cow)

Gene Details

FGFR1 oncogene partner

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000019271, Cow)

Protein Percentage 88.48%
cDNA percentage 88.18%
Ka/Ks Ratio 0.17149 (Ka = 0.0654, Ks = 0.3815)

Additional orthologs identified in other species via the OPTIC pipeline.

FGFR1OP (Human)   Fgfr1op (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1212 bp    Location:189982..187530   Strand:-
Raw sequence 
>bmy_17880
ATGGCGGCGGCGGCGGCCGCGGTGGTGGCGGAGGAGGACACGGAGCTGCGGGACCTGCTGGTGCAGACGCTTGAGAACACCGGGGTCGCATCAAGGCTGAACTCCGAGCAGCTGTCGCTAGAGGAGCAAGAAAAAGTAGAGAACAAAACTCCTTTAGTCAATGAGAGCCTGAAAAAGTTTTTAAATACGAAAGATGGCCGGCTGGTGGCTAGTCTCGTTGCCGAATTTCTTCAGTTTTTCAATCTTGACTTTACCTTGGCTGTTTTTCAACCTGAAACTAGCACATTTCAAGGTCTCGAAGGTCGAGAGAATTTAGCCCGAGATTTAGGAATTATTGAAGCAGAAGGTACGGTGGGTGGACCCTTATTATTAGAAGTGATCAGACGCTGTCAACAGAAAGAAAAAGGGCCAACCAGTGGGGAAGGTGCACTAGATCTGTCTGATGTACGTCCTCCACCAAAGTCCCCAGAAGGAAAAACAAGTGCACACAGTCTCCCCAGTAAGAAGGCCAGCAATGATGCTAGTCAGAGTGATACCAGTATCTCATCATCAGAACCAAAGAGCAAAAGTAGTCTTCACTTACTGGCCCATGAAACAAAAATTGGATCCTTGTTAAGCAACAAAAGTCTAGATGTCAAAGACAAAGCTGGTCCTTGTCCAGATGAAGATGATATGGAAGGAGATTCTTTCTTTGATGATCCCATTCCTAAACCAGAAAAAACCTATGAAGTGAACCTAGTAAGCAATGGAGTCAGCTCCCTTACTGGAGCTCCCTCATTGAAAGACTCTGAAAGTAAAAGGGGAAACACAATTTTGAAAGATCTTAAATTGGTCAATGATAAAATTGGATCACTTGGTTTGGGGACTGGAGAAGAAGATGACTATGTTGATGATTTTAATAGTACCAGCCATCGCTCAGAAAAAAGTGAGCTAAGTATTGGTGAAGAGATCGAGGAAGACCTCTCTGTGGAAATAGATGACGTCAATACCAGTGATAAACTTGATGACCTGACACAGGACCTCACTGTGTCCCAGCTCAGTGATGTTGCGGATTATCTGGAAGATGTTGCTGACATCACTGATCCTGAAGTATTAAAAAGAACAATTGGAAGTGGTGCGTGCATGTTCATATTGATTCTAAATATTACAGAAATATTTACTAGGCTCCGAAATGTAAAGGGAAATGATAATGTATGGATCAAGGTTATGTGA

Related Sequences

bmy_17880T0 SequenceType object (3)

Length: 404 aa      View alignments
>bmy_17880T0
MAAAAAAVVAEEDTELRDLLVQTLENTGVASRLNSEQLSLEEQEKVENKTPLVNESLKKFLNTKDGRLVASLVAEFLQFFNLDFTLAVFQPETSTFQGLEGRENLARDLGIIEAEGTVGGPLLLEVIRRCQQKEKGPTSGEGALDLSDVRPPPKSPEGKTSAHSLPSKKASNDASQSDTSISSSEPKSKSSLHLLAHETKIGSLLSNKSLDVKDKAGPCPDEDDMEGDSFFDDPIPKPEKTYEVNLVSNGVSSLTGAPSLKDSESKRGNTILKDLKLVNDKIGSLGLGTGEEDDYVDDFNSTSHRSEKSELSIGEEIEEDLSVEIDDVNTSDKLDDLTQDLTVSQLSDVADYLEDVADITDPEVLKRTIGSGACMFILILNITEIFTRLRNVKGNDNVWIKVM*