Part of scaffold_1620 (Scaffold)

For more information consult the page for scaffold_1620 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ST3GAL5 ENSTTRG00000008593 (Bottlenosed dolphin)

Gene Details

ST3 beta-galactoside alpha-2,3-sialyltransferase 5

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008147, Bottlenosed dolphin)

Protein Percentage 93.9%
cDNA percentage 94.82%
Ka/Ks Ratio 0.35804 (Ka = 0.0386, Ks = 0.1077)

BT.52500 ENSBTAG00000011601 (Cow)

Gene Details

lactosylceramide alpha-2,3-sialyltransferase

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000015414, Cow)

Protein Percentage 89.33%
cDNA percentage 90.04%
Ka/Ks Ratio 0.25185 (Ka = 0.0644, Ks = 0.2556)

ST3GAL5  (Minke Whale)

Gene Details

ST3 beta-galactoside alpha-2,3-sialyltransferase 5

External Links

Gene match (Identifier: BACU005903, Minke Whale)

Protein Percentage 88.41%
cDNA percentage 89.84%
Ka/Ks Ratio 0.47198 (Ka = 0.0897, Ks = 0.1902)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 987 bp    Location:311595..324852   Strand:+
>bmy_17882
ATGAGCCCCGGGGCAGACTGTGGGGCAAGTCTGTGTGCTTCGTTCCAGAGAGCCCAGCAATATGCCCAGCAAGTCCTGCAGAAGGAATGCCGGCCCCAGTTTGCCAAGAGGTCGATGGTGCAGCTCTTCAGGCACAGGTACAGCTCGGACCTGCCACCTTTCGTGACGAAGGCCCCCGCAGGGAGCGAGGCCGAGTACAAGTACAACCCTCCTTTCGGATTCCGGAAGTTCTCCGAGAAAGTCCAGACCCTCTTGGATCTCTTGCCCGAGCATGACTTTCCTGCACACTTGAAAGCCAAGAGCTGCAGGCGTTGTGTGGTCATTGGAAGTGGTGGAATCCTCCACGGACTAGAGCTGGGCCAGGCCCTGAACCAGTTCGATGTTGTGATAAGGTTAAACAGTGCACCGGTTGAAGGATATTCAGAGCATGTTGGAAATAAAACTACTATAAGGATGACTTATCCAGAGGGTGCGCCACTGTCTGACCTTGAATATTATTCCAATGACTTGTTTGTTGCCGTTTTATTTAAGAGTGTTGACTTCAACTGGCTTCAGGCGATGGTCAAAAATGAAACCCTGCCGTTTTGGGTGCGACTCTTCTTTTGGAAGCAGGTGGCGGAAAAAATCCCATTACAGCCAAAACAGTTCAGGATTTTGAATCCAGTTATTATCAAAGAGACTGCCTTTGACATCCTTCAATACTCAGAGCCTCAGTCAAGGTTCTGGGGCCGAGATAAGAACGTCCCCACGATTGGTGTCATTGCCGTTGTCTTAGCCACGCATCTGTGCGATGAAGTCAGTTTGGCGGGCTTTGGCTATGACCTCAGCCAACCCAGAACACCTTTGCACTACTTTGACAATCTCTGTATGGCTGCCATGAACTTTCAGACCATGCACAATGTGACCACAGAGACCGGGTTCCTCCTGAAGCTGGTCAGAGAGGGCGTGGTGAGGGATCTCAGCGGAGGCATCCATTGTGAATTTTGA

Related Sequences

bmy_17882T0 Protein

Length: 329 aa      View alignments
>bmy_17882T0
MSPGADCGASLCASFQRAQQYAQQVLQKECRPQFAKRSMVQLFRHRYSSDLPPFVTKAPAGSEAEYKYNPPFGFRKFSEKVQTLLDLLPEHDFPAHLKAKSCRRCVVIGSGGILHGLELGQALNQFDVVIRLNSAPVEGYSEHVGNKTTIRMTYPEGAPLSDLEYYSNDLFVAVLFKSVDFNWLQAMVKNETLPFWVRLFFWKQVAEKIPLQPKQFRILNPVIIKETAFDILQYSEPQSRFWGRDKNVPTIGVIAVVLATHLCDEVSLAGFGYDLSQPRTPLHYFDNLCMAAMNFQTMHNVTTETGFLLKLVREGVVRDLSGGIHCEF*