Sequence details bmy_17899 (Coding sequence)

Part of scaffold_1618 (Scaffold)

For more information consult the page for scaffold_1618 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SP4 ENSTTRG00000001927 (Bottlenosed dolphin)

Gene Details

Sp4 transcription factor

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001809, Bottlenosed dolphin)

Protein Percentage 96.31%
cDNA percentage 96.19%
Ka/Ks Ratio 0.3973 (Ka = 0.0285, Ks = 0.0719)

SP4 ENSBTAG00000014389 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000019135, Cow)

Protein Percentage 93.29%
cDNA percentage 93.11%
Ka/Ks Ratio 0.28139 (Ka = 0.0445, Ks = 0.1583)

SP4  (Minke Whale)

Gene Details

Sp4 transcription factor

External Links

Gene match (Identifier: BACU018545, Minke Whale)

Protein Percentage 96.49%
cDNA percentage 96.49%
Ka/Ks Ratio 0.45133 (Ka = 0.0277, Ks = 0.0614)

Additional orthologs identified in other species via the OPTIC pipeline.

SP4 (Human)   Sp4 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1773 bp    Location:393267..395741   Strand:+
Raw sequence 
>bmy_17899
ATGGGGGTGTTTGTTGCAGATCAGAAGAAGGAGGAGGAGGAGGAGGCGGCGGCGGCGGCGGCGGCAGCGGCGATGGCTACAGAAGGAGGGAAAACCTCTGAGCCAGAGAATAACAATAAAAAACCCAAAACCTCAGGCTCCCAGGACTCTCAGCCCTCTCCTCTGGCTTTACTGGCAGCTACTTGCAGCAAAATAGGGACTCCTGGTGAAAATCAAGCAACTGGACAACAACAAATCATTATAGACCCAAGCCAAGGATTGGTGCAACTTCAAAATCAACCACAACAGCTAGAACTGGTAACGACACAACTTGCTGGAAACGCTTGGCAACTTGTTGCCTCCACTCCTCCCGCTTCAAAAGAAAATAACGTTTCTCAACCAGCTTCTAGTTCATCTAGTTCTTCCAGCAGTAATAACGGGAGTGCATCTCCCACAAAAACTAAATCAGGTAATTCTTCCTCCCCTGGTCAGTTTCAAGTCATACAAGTACAAAATCCAAGTGGTAGTGTACAGTACCAAGTGATTCCACAACTTCAAACAGTGGAAGGCCAGCAAATTCAAATCAATCCAACTAGTAGTTCATCTCTACAGGATTTGCAGGGTCAAATTCAGCTCATTTCTGCAGGTAATAATCAAGCTATACTCACAGCTGCTAACAGGACAGCTTCTGGGAATATTCTTGCTCAAAACCTGGCGAATCAGACAGTTCCAGTCCAAATTAGACCTGGTGTCTCAATACCACTGCAATTACAGACCCTTCCTGGTACTCAGGCTCAAGTTGTAACAACCCTACCAATTAACATTGGAGGAGTGACTTTAGCTTTGCCAGTGATAAACAGTGTGGCCGCTGGAGGAGGGACTGGGCAGGTCGGCCAGTCTGCTCCTACTACTGATGGCGGGACTTCCAATGGGAGTCAGTTAGTTCCCACACCCACCACCACTGCTTCTGCCAGTACTATGCCAGAATCGCCCTCCTCCTCCACTGCCTGCACAACCACTGCATCAACATCTCTGAGCAGCAGTGACACGTTAGTGAGCTCAGCAGATACGGGCCAGTATGCAAGCACGTCAGCCAGTAGTTCTGAACGCACCATCGAAGATTCTCAAACGCCTGCTGCTACTGAGTCTGAAGCCCAGAGCTCCAGTCAGCTTCAGTCTAATGGAATACAGAGTACACAGGATCAATCAAATTCTCTTCAGCAGGTGCAAATTGTAGGCCAGCCTATCTTGCAACAGATCCAGATCCAACAGCCTCAGCAACAGATAATTCAGGCTATTCCACCACAGTCATTTCAACTCCAGTCCGGGCAGACGATTCAGACCATCCAGCAGCAGCCTTTGCAGAATGTTCAACTTCAAGCAGTAAATCCGACTCAGGTGCTTATCAGGGCTCCAACTTTAACACCTTCAGGGCAAATCAGCTGGCAAACTGTTCAGGTTCAGAATATTCAGAGTCTTTCAAATTTGCAAGTTCAGAATGCTGGGTTATCCCAACAATTAACCATCACCCCAGTGTCTTCAAGCGGTGGCACAACTCTGGCTCAGATTGCTCCCGTGGCTGTTGCTGGCGCCCCAATAACTTTGAATACTGCCCAGCTTGCATCAGTGCCTAATCTTCAGACAGTGAGTGTTGCCAACCTGGGTGCTGCGGGCGTTCAAGTGCAAGGAGTTCCAGTTACAATCACCAGTGTTGCAGGTAAGTCAACTGCAATCTTTTCTCTCTGGTTGTTAATAACGGTTGGTTATTGTTTTTCCTTGCTAACTCAGATTTGA

Related Sequences

bmy_17899T0 Protein

Length: 591 aa      View alignments
>bmy_17899T0
MGVFVADQKKEEEEEAAAAAAAAAMATEGGKTSEPENNNKKPKTSGSQDSQPSPLALLAATCSKIGTPGENQATGQQQIIIDPSQGLVQLQNQPQQLELVTTQLAGNAWQLVASTPPASKENNVSQPASSSSSSSSSNNGSASPTKTKSGNSSSPGQFQVIQVQNPSGSVQYQVIPQLQTVEGQQIQINPTSSSSLQDLQGQIQLISAGNNQAILTAANRTASGNILAQNLANQTVPVQIRPGVSIPLQLQTLPGTQAQVVTTLPINIGGVTLALPVINSVAAGGGTGQVGQSAPTTDGGTSNGSQLVPTPTTTASASTMPESPSSSTACTTTASTSLSSSDTLVSSADTGQYASTSASSSERTIEDSQTPAATESEAQSSSQLQSNGIQSTQDQSNSLQQVQIVGQPILQQIQIQQPQQQIIQAIPPQSFQLQSGQTIQTIQQQPLQNVQLQAVNPTQVLIRAPTLTPSGQISWQTVQVQNIQSLSNLQVQNAGLSQQLTITPVSSSGGTTLAQIAPVAVAGAPITLNTAQLASVPNLQTVSVANLGAAGVQVQGVPVTITSVAGKSTAIFSLWLLITVGYCFSLLTQI*