Part of scaffold_1628 (Scaffold)

For more information consult the page for scaffold_1628 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HCRTR2 ENSTTRG00000000746 (Bottlenosed dolphin)

Gene Details

hypocretin (orexin) receptor 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000703, Bottlenosed dolphin)

Protein Percentage 99.44%
cDNA percentage 98.98%
Ka/Ks Ratio 0.10012 (Ka = 0.0028, Ks = 0.0276)

BT.88515 ENSBTAG00000011719 (Cow)

Gene Details

orexin receptor type 2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000015561, Cow)

Protein Percentage 98.06%
cDNA percentage 93.61%
Ka/Ks Ratio 0.03961 (Ka = 0.0104, Ks = 0.2613)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1083 bp    Location:110115..139418   Strand:+
>bmy_17913
ATGAGGACAGTGACCAATTACTTCATCGTCAACCTTTCTCTGGCTGACGTGCTCGTGACCATCACCTGCCTTCCAGCCACTTTAGTAGTGGACATTACTGAGACCTGGTTCTTTGGACAATCCCTCTGTAAAGTGATTCCTTATTTACAGACCGTGTCAGTGTCTGTGTCTGTCCTCACACTGAGCTGCATTGCCTTGGATCGGTGGTATGCGATCTGTCACCCTTTGATGTTTAAGAGCACAGCCAAGCGGGCCCGGAACAGCATCGTCATCATCTGGATCGTGTCCTGCATCATAATGATCCCTCAGGCCATCGTCATGGAGTGCAGCACCATGCTTCCTGGCTTAGCCAATAAAACCACTCTCTTTACAGTCTGTGATGAGCACTGGGGCGGTGAAATTTACCCCAAGATGTATCACATCTGTTTCTTTCTGGTGACCTACATGGCACCACTGTGTCTTATGGTGTTGGCCTATCTGCAAATATTTCGTAAACTCTGGTGCCGACAGATTCCTGGAACATCATCTGTAGTTCAGAGAAAATGGAAGGCCCTGCAGCCTCTTTCACAGCCTCGGGGGCCAGGACAGCAGACCAAATCCAGGATTAGCGCTGTGGCCGCTGAAATAAAGCAGATCCGAGCCAGACGGAAAACAGCCCGGATGCTGATGGTTGTGCTTTTGGTGTTTGCAATTTGCTATCTACCAATTAGCATCCTCAATGTGCTAAAGAGAGTATTTGGGATGTTTACCCACACAGAAGACAGAGAGACTGTATATGCCTGGTTTACATTTTCACACTGGCTTGTATACGCCAATAGTGCTGCGAACCCAATTATTTATAATTTTCTCAGTGGAAAATTTCGAGAGGAATTTAAAGCTGCATTTTCTTGCTGTTGCCTTGGAGTTCATCACCGCCAGGAGGATCCGCTGGCCCGGGGACGGACAAGCACCGAGAGCCGAAAGTCCCTGACCACCCAGATCAGCAACACTGATAACATATCAAAACTGTCCGAGCAGGTCGTGCTCACGAGCATTAGCACACTCCCAGCGGCCAACGGTGCGGGGCCGCTCCAAAACTGGTAG

Related Sequences

bmy_17913T0 Protein

Length: 361 aa      View alignments
>bmy_17913T0
MRTVTNYFIVNLSLADVLVTITCLPATLVVDITETWFFGQSLCKVIPYLQTVSVSVSVLTLSCIALDRWYAICHPLMFKSTAKRARNSIVIIWIVSCIIMIPQAIVMECSTMLPGLANKTTLFTVCDEHWGGEIYPKMYHICFFLVTYMAPLCLMVLAYLQIFRKLWCRQIPGTSSVVQRKWKALQPLSQPRGPGQQTKSRISAVAAEIKQIRARRKTARMLMVVLLVFAICYLPISILNVLKRVFGMFTHTEDRETVYAWFTFSHWLVYANSAANPIIYNFLSGKFREEFKAAFSCCCLGVHHRQEDPLARGRTSTESRKSLTTQISNTDNISKLSEQVVLTSISTLPAANGAGPLQNW*