Sequence detailsbmy_17917 (Coding sequence)

Part of scaffold_1664 (SequenceType object (1))

For more information consult the page for scaffold_1664 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LACC1ENSTTRG00000015947 (Bottlenosed dolphin)

Gene Details

laccase (multicopper oxidoreductase) domain containing 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000015108, Bottlenosed dolphin)

Protein Percentage 95.51%
cDNA percentage 97.36%
Ka/Ks Ratio 0.54101 (Ka = 0.0225, Ks = 0.0416)

LACC1ENSBTAG00000016691 (Cow)

Gene Details

laccase domain-containing protein 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000022192, Cow)

Protein Percentage 91.29%
cDNA percentage 93.49%
Ka/Ks Ratio 0.26482 (Ka = 0.0421, Ks = 0.1591)

LACC1 (Minke Whale)

Gene Details

laccase (multicopper oxidoreductase) domain containing 1

External Links

Gene match (Identifier: BACU012170, Minke Whale)

Protein Percentage 95.91%
cDNA percentage 97.52%
Ka/Ks Ratio 0.50994 (Ka = 0.0209, Ks = 0.041)

Additional orthologs identified in other species via the OPTIC pipeline.

LACC1 (Human)   Lacc1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1140 bp    Location:262827..271349   Strand:+
Raw sequence 
>bmy_17917
ATGGCAGAAGCAGTGTTGATAGATCTCTTTGGCTTGAAATTAAACTCTCAGAAAAACTGTCATCAGACATTACTAAAGACATTGAATGCTGTCCGATACCACCATGGTGCCAAGGCCAAGTTCCTTTGCATAATGTGTTGCAGTAACATCAGCTGTGACCATGATAATTGTGAATTAGAAACAAGCAATGGATTATCTGCTTTCCTGAGAGAATTTGAGACTGTTAGCAATCCCAGCATGGCTGCCTCATTGTATACCATTAAACAAAAAATTGATGAAAAAAATTTGAGCAGCATTAAGGTAATTGTGCCTGTGCACCGGAAGACATTAATGAAGGCTTTTATTGGTCAACTCTTCACTGATGTTTACAATTTTGAGTTTGAAGATTTACAGATGACTTTGAAGGGAGGTCTTTTGAAACAGCCTACTGAAATAAACATAATCACAGCTCAAGAACTAGAAGCAATCCAGAATGAAATAGAAACATATTTGAGAAGTTTGCCAGCACTGAAAGGAGAATTAACCATTATCACATCGCCTTTGATCCCAGATATTTTCATACATGGATTTACTACAAGAACAGGTGGGATATCTTACATACCAACTCTTAGCTCATTCAATCTCTTCAGTAGTTCCAAACGGAGAGATCCCAAGGCTGTTGTTCAAGAAAATCTGCGTAGGCTGGGGAATGCTGCAGGATTTAATGTGAAGAAATTTTACCAAATAAAGATGCGTACTTTCAGAAAAGCTTATGGTTGGAGAGGTACTTTGCTAGGTGTTGCTATGGCTACAGTGAATGCTATGATAGCAGAATACGGCTGTAGTTTGGAAGACATTATTGTTGTACTGGGGCCTTCAGTAGGACCTTGCTGTTTTACTCTTCCAAGGGAATCAGCAAAGGCATTTTATAATCTTGATCCCAGATGTGTACGGCTCTTTGGCTCACCAAATCCCTATGTTGACATCCGTAAAGCCACGAGGATTCTTCTAGAACAGGGAGGAATTCTACCACAGAATATTCAGGACCAGAACCAAGATCTCAACCTCTGTACTTCCTGTCATCCTGACAAGTTTTTCTCCCATGTCCGAGACGGCCTTAACTTTGGTACACAGATTGGCTTCATATCAATTAGAGAATGA

Related Sequences

bmy_17917T0 SequenceType object (3)

Length: 380 aa      View alignments
>bmy_17917T0
MAEAVLIDLFGLKLNSQKNCHQTLLKTLNAVRYHHGAKAKFLCIMCCSNISCDHDNCELETSNGLSAFLREFETVSNPSMAASLYTIKQKIDEKNLSSIKVIVPVHRKTLMKAFIGQLFTDVYNFEFEDLQMTLKGGLLKQPTEINIITAQELEAIQNEIETYLRSLPALKGELTIITSPLIPDIFIHGFTTRTGGISYIPTLSSFNLFSSSKRRDPKAVVQENLRRLGNAAGFNVKKFYQIKMRTFRKAYGWRGTLLGVAMATVNAMIAEYGCSLEDIIVVLGPSVGPCCFTLPRESAKAFYNLDPRCVRLFGSPNPYVDIRKATRILLEQGGILPQNIQDQNQDLNLCTSCHPDKFFSHVRDGLNFGTQIGFISIRE*