Part of scaffold_1639 (Scaffold)

For more information consult the page for scaffold_1639 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SLITRK2 ENSTTRG00000017178 (Bottlenosed dolphin)

Gene Details

SLIT and NTRK-like family, member 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016281, Bottlenosed dolphin)

Protein Percentage 95.02%
cDNA percentage 94.27%
Ka/Ks Ratio 0.01923 (Ka = 0.0006, Ks = 0.0309)

SLITRK2 ENSBTAG00000039377 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000056147, Cow)

Protein Percentage 98.34%
cDNA percentage 93.21%
Ka/Ks Ratio 0.02367 (Ka = 0.0074, Ks = 0.314)

SLITRK2  (Minke Whale)

Gene Details

SLIT and NTRK-like family, member 2

External Links

Gene match (Identifier: BACU010860, Minke Whale)

Protein Percentage 99.76%
cDNA percentage 99.45%
Ka/Ks Ratio 0.0796 (Ka = 0.0012, Ks = 0.0145)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2538 bp    Location:451988..454525   Strand:+
>bmy_17921
ATGCTGAGCGGCGTTTGGTTCCTCAGTGTGTTAACCGTGGCCGGGATCTTACAGACCGAGAGTCGCAAAACTGCCAAAGACATTTGCAAGATCCGCTGCCTGTGCGAAGAGAAGGAAAACGTACTGAATATTAACTGCGAAAACAAAGGATTTACAACTGTCAGCCTGCTCCAGCCCCCCCARTATCGAATCTATCAGCTTTTCCTCAATGGCAACCTCCTGACGAGACTGTACCCCAACGAGTTCGTCAATTACTCCAACGCGGTTACTCTCCACCTGGGTAACAACGGGCTGCAGGAGATCCGAACCGGGGCGTTCAGCGGCCTGAAAACCCTCAAGAGGCTGCACCTCAACAACAACAAGCTCGAAGTGCTGAGGGAGGACACCTTCCTGGGCCTCGAGAGCCTCGAGTACCTCCAGGCCGACTACAATTACATCAGTGCCATCGAGGCGGGGGCCTTCAGCAAACTGAACAAGCTCAAAGTGCTCATCCTGAATGACAACCTCCTGCTGTCTCTGCCCAGCAATGTGTTCCGCTTCGTCCTGCTGACCCACTTAGACCTGCGAGGGAACCGGCTGAAAGTGATGCCTTTCGCCGGCGTCCTCGAGCATATCGGAGGCATCATGGAGATTCAGCTGGAGGAAAACCCGTGGAATTGCACTTGTGACTTACTTCCTCTCAAGGCTTGGCTGGACACCATAACCGTTTTTGTGGGGGAGATTGTCTGTGAAACTCCCTTCAGATTGCATGGGAAAGATGTGACCCAGCTGACCAGGCAAGACCTCTGTCCCAGAAAAAGTACCGGTGACTCTGGTCAGAGGGGCGGCCACGCTGACACACATGTCCAAAGGCTGTCACCTACAATGAATCCGGCTCTCAACCCAACCAGGGCTGCAAAAGCCAGCCGGCCACCCAAAATGAGAAATCGCCCAACTCCCCGGGTCACAGTGTCGAAAGACAGGCAGAGCTTTGGACCCATCATGGTGTACCAGACCAAGTCCCCGGTGCCCCTCACCTGCCCCAGTAGTTGTGTCTGCACCTCTCAGAGTTCAGACAATGGTTTAAATGTCAACTGCCAAGAAAGGAAGTTCACTAATATCTCCGACCTGCAGCCTAAACCTACCAGTCCAAAGAAACTCTACCTAACAGGGAACTATCTTCAAACTGTCTATAAGAATGACCTCTTAGAATACAGTTCTTTGGACCTCTTGCATTTAGGAAACAATAGGATTGCAGTCATTCAGGAAGGTGCCTTCACAAACCTGACCAGTTTACGCAGACTTTATCTAAATGGCAATTACCTTGAAGTGCTATATCCGGCTATGTTTGATGGACTGCAGAGCTTGCAGTATCTCTATTTAGAGTATAATGTCATTAAGGAAATTAAGCCGCTGACCTTTGATGCTTTGATTAACCTACAGCTACTGTTTCTGAATAACAACCTGCTGCGGTCCTTACCTGATAATATATTTGGGGGCACGGCCCTCACCAGGCTGAATCTGAGGAACAACCATTTTTCTCACCTGCCTGTGAAAGGGGTTCTGGATCAGCTTCCGGCTTTTATCCAGATAGATCTGCAAGAGAACCCGTGGGACTGCACCTGTGACATCATGGGACTAAAGGACTGGACAGAGCATGCCAACTCCCCTGTCATCATCAATGAGGTGACCTGTGAATCTCCCGCTAAGCACGCTGGGGAGATCCTGAAGTTTCTGGGCAGGGAGGCTATTTGTCCAGACGGTCCAAACTTGTCAGACGGAACCATTTTGTCAATGAATCACAACACAGACACACCTCGCTCACTTAGTGTGTCTCCCAGTTCCTATCCTGAACTACACACTGAAGTTCCACTTTCCGTCTTAATTTTAGGATTGCTGGTTGTCTTTATCTTATCTGTCTGCTTTGGGGCTGGCCTATTCGTCTTTGTCCTGAAACGCCGAAAGGGAGTGCCAAGTGTTCCCAGGAGTGCCAACAACTTAGATGTAAGTTCCTTCCAGTTACAGTATGGGTCTTATAACACTGAGACTCAGGATAAAGCAGACGGCCACGTCTATAACTACATCCCCCCACCTGTGGGTCAGATGTGCCAAAACCCCATCTACATGCAGAAGGAAGGAGACCCAGTGGCCTATTACCGAAACCTGCAAGAATTCAGTTACAGCAACCTGGAGGAGAAGAAAGAAGAGCCAGCCACACTTGCTTACACTATAAGTGCCACCGAGTTGCTAGAAAAGCAAGCCACCCCAAGAGAGCCCGAGCTGCTGTATCAGAATATCGCTGAGCGCGTCAAGGAGCTCCCCAGTGCAGGACTCGTCCACTATAACTTTTGTACCTTACCTAAAAGGCAGTTCGCCCCTTCGTATGAATCTCGACGCCAAAACCAAGACAGAATCAATAAAACCGTTTTATATGGAACTCCCAGGAAATGCTTTGTGGGGCAGTCAAAACCAGACCACCCTTTACTGCAAGCTAAGCCGCAATCAGAACCAGACTACCTCGAAGTTCTGGAAAAACAAACTGCAATCAGTCAGCTGTGA

Related Sequences

bmy_17921T0 Protein

Length: 846 aa      View alignments
>bmy_17921T0
MLSGVWFLSVLTVAGILQTESRKTAKDICKIRCLCEEKENVLNINCENKGFTTVSLLQPPQYRIYQLFLNGNLLTRLYPNEFVNYSNAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNNKLEVLREDTFLGLESLEYLQADYNYISAIEAGAFSKLNKLKVLILNDNLLLSLPSNVFRFVLLTHLDLRGNRLKVMPFAGVLEHIGGIMEIQLEENPWNCTCDLLPLKAWLDTITVFVGEIVCETPFRLHGKDVTQLTRQDLCPRKSTGDSGQRGGHADTHVQRLSPTMNPALNPTRAAKASRPPKMRNRPTPRVTVSKDRQSFGPIMVYQTKSPVPLTCPSSCVCTSQSSDNGLNVNCQERKFTNISDLQPKPTSPKKLYLTGNYLQTVYKNDLLEYSSLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLYPAMFDGLQSLQYLYLEYNVIKEIKPLTFDALINLQLLFLNNNLLRSLPDNIFGGTALTRLNLRNNHFSHLPVKGVLDQLPAFIQIDLQENPWDCTCDIMGLKDWTEHANSPVIINEVTCESPAKHAGEILKFLGREAICPDGPNLSDGTILSMNHNTDTPRSLSVSPSSYPELHTEVPLSVLILGLLVVFILSVCFGAGLFVFVLKRRKGVPSVPRSANNLDVSSFQLQYGSYNTETQDKADGHVYNYIPPPVGQMCQNPIYMQKEGDPVAYYRNLQEFSYSNLEEKKEEPATLAYTISATELLEKQATPREPELLYQNIAERVKELPSAGLVHYNFCTLPKRQFAPSYESRRQNQDRINKTVLYGTPRKCFVGQSKPDHPLLQAKPQSEPDYLEVLEKQTAISQL*