Part of scaffold_1633 (Scaffold)

For more information consult the page for scaffold_1633 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRAF3IP1 ENSTTRG00000009977 (Bottlenosed dolphin)

Gene Details

TNF receptor-associated factor 3 interacting protein 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009469, Bottlenosed dolphin)

Protein Percentage 73.0%
cDNA percentage 79.53%
Ka/Ks Ratio 0.87193 (Ka = 0.0708, Ks = 0.0812)

TRAF3IP1 ENSBTAG00000015973 (Cow)

Gene Details

TRAF3-interacting protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000045498, Cow)

Protein Percentage 78.33%
cDNA percentage 83.38%
Ka/Ks Ratio 0.19499 (Ka = 0.1185, Ks = 0.6079)

TRAF3IP1  (Minke Whale)

Gene Details

TNF receptor-associated factor 3 interacting protein 1

External Links

Gene match (Identifier: BACU011017, Minke Whale)

Protein Percentage 90.63%
cDNA percentage 93.06%
Ka/Ks Ratio 0.40955 (Ka = 0.0579, Ks = 0.1415)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1491 bp    Location:335634..320072   Strand:-
>bmy_17948
TATCCAATAGAAGAACTAAAAACAGACCCACAAAGCTTCAAAACTGATAGAAGGATCTGCAGGACGTTGAGGCAGCCTCACCGCAGACGCCGCCCAAGTGCGCGCGCAGCCGGACAGGGGTCGGGGCGCCGCCGCGGGTCCGTTGCTAAGGCCGCGCCGCCCTGGCGACCGAGGGCCGCGGCCCCGCGCACGCGCCTTGGCGGACTCCGGTGCACTGTGGGATGGAAACTCGAGCGGCGCGTCCAGGCCGGACCTGGCCGCGGCGGCGGGGCCGGCGGCGGCTGGGGAGCGGGGCTTAAGCTCGGCGGCCGGCGAGACGCGGGCGGCGCCGCCATGAACGCGGCGGTGGTGAAGCGAACGCAGGAGGCTCTGGGGAAGGTGATTCGGAGGCCGCCGCTGACGGAGAAGCTGCTGAACAAGCCCCCGTTCCGCTACCTGCACGACATCATCACGGAGGTGATCAGGACGACTGGCTTCATGAAGGGCCTCTACACAGACGCCGAGATGAAGTCTGATAACGTTAAGGATAAAGATGCCAAAATTAGCTTCCTTCAGAAGGCCATAGACGTGGTGGTCATGGTCTCCGGAGAGCCACTGTTGGCAAAACCGGCTCGGATCGTGGCCGGGCACGAGCCTGAAAGGACCAACGAGCTGCTCCAGAGGATCGGAAAGTGCTGTCTCAACAAGCTCTCCAGCGACGATGCGGTGAAGAGAGTGTTAGCCGGAGAGAAGGCGGAAACAAAAGGAAGGTCCTCACTGACGTCGAAACCTCAAGAATTGGATAATAAGAACGTGAGGGTGGAAGCGTCCAGGGTCCCTAAAGATAAAGCGGATAGAAGAAACTCTGAAATAAACGAGAGAAATACAAGCGGAGGTCGAAAACAGAAAGAGGAATTAAAGGAAGAAAACAAACCAAGAGAAAAGGAAAGGGACAAGGAAAAGGCCAAGGAGAATGACCGAGACAGACACAAAGATCCCGAGAGAGACAAGTACCACGAAGGGGAGAGAGAGCGGGCCAAGAACAGGGCCCGGCCGGAGAGGGACAGGGCCAAGGACGCAGAGCGGGAGAGGGAGCGGATGAACGAGGGCGGAAAGGAGAAGGAGAAGCGGAAGGACCGGGAGAGAGAGCGCGAGCGAGACAGGGACCGGGACCGGGGCCGGCAGAGGGTGCGGAACGGGGAGCACGGCGGGGACCCCGACGGGGAGAAGAGCCACGAGCGTGATAAGCCGGAGAAGAAGTCCTCAAGCTCAGGAGAGATGTCTAAAAAGTCGTCAGATGGATCTTTCAAAGACTCCAAAGCTGAAACAGAGACTGAGATTCCCACTAGAGCATCCAGGTCAGTGACGACAAAGACATCAAAACGGCGATCCAAAAATTCAGAGGATGATATTTCAGCTAAAATTTTAGACCCCATAGTGTCTGGATTAAATAATGAACCAGATCAGGAAACTACAACTTCAGAAATAGTGTATCGAAGAACAGAAATGACT

Related Sequences

bmy_17948T0 Protein

Length: 497 aa      View alignments
>bmy_17948T0
YPIEELKTDPQSFKTDRRICRTLRQPHRRRRPSARAAGQGSGRRRGSVAKAAPPWRPRAAAPRTRLGGLRCTVGWKLERRVQAGPGRGGGAGGGWGAGLKLGGRRDAGGAAMNAAVVKRTQEALGKVIRRPPLTEKLLNKPPFRYLHDIITEVIRTTGFMKGLYTDAEMKSDNVKDKDAKISFLQKAIDVVVMVSGEPLLAKPARIVAGHEPERTNELLQRIGKCCLNKLSSDDAVKRVLAGEKAETKGRSSLTSKPQELDNKNVRVEASRVPKDKADRRNSEINERNTSGGRKQKEELKEENKPREKERDKEKAKENDRDRHKDPERDKYHEGERERAKNRARPERDRAKDAERERERMNEGGKEKEKRKDRERERERDRDRDRGRQRVRNGEHGGDPDGEKSHERDKPEKKSSSSGEMSKKSSDGSFKDSKAETETEIPTRASRSVTTKTSKRRSKNSEDDISAKILDPIVSGLNNEPDQETTTSEIVYRRTEMT