Sequence detailsbmy_17973 (Coding sequence)

Part of scaffold_1631 (SequenceType object (1))

For more information consult the page for scaffold_1631 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RIMBP2ENSTTRG00000016996 (Bottlenosed dolphin)

Gene Details

RIMS binding protein 2

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000016113, Bottlenosed dolphin)

Protein Percentage 71.65%
cDNA percentage 74.51%
Ka/Ks Ratio 0.33919 (Ka = 0.043, Ks = 0.1268)

RIMBP2ENSBTAG00000009797 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000036905, Cow)

Protein Percentage 90.34%
cDNA percentage 90.31%
Ka/Ks Ratio 0.14318 (Ka = 0.0497, Ks = 0.3468)

RIMBP2 (Minke Whale)

Gene Details

RIMS binding protein 2

External Links

Gene match (Identifier: BACU013683, Minke Whale)

Protein Percentage 94.62%
cDNA percentage 96.61%
Ka/Ks Ratio 0.42719 (Ka = 0.0277, Ks = 0.0649)

Additional orthologs identified in other species via the OPTIC pipeline.

RIMBP2 (Human)   Rimbp2 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 3855 bp    Location:94367..172475   Strand:+
Raw sequence 
>bmy_17973
ATGCGAGAGGCGGCGGAACGGCGGCAGCAGCTGGAATTGGAGCATGAACAAGCCCTGGCCGTCCTCAACGCCAAGCAGCAGGAAATCGACCTCCTGCAGAAGTGCAGGGTGCGGGAGCTGGAGGAGAAATGCCGCGCGCAGGGTGAGCAGTTCAGCCTGCTGTCCCGGGACCTGGAGCAGCTCCGGCAGCACGCGGGCGAGAGCGACCTGCTGGGAGGCAGCTCCCTGGACGTCCCCGCGTCCCCCGGCAAGCCCTTCCGGAGGTTCGTGAACGGACTGGCTCCCTCCATTGGCAAAGGTCAGGAAAGCACCATTGGAAGCCGCGCTGTGATCGGGGAATATATCCGGCCCCTCCCACTCCCGGGTGACAAGCCAGAACCTCTGTCCGTCAAGCCCGCCTTTCTGTCAAGATCTGGTGGCCCAAGATGCAGATTTGAATCAGACATGGATAATGAACGGAATTCCAATACCGCCAAGCAGAGATACTCGGGGAAGGTCCACTTGTGTGTCGCCCGCTATAGTTACAACCCCTTCGACGGGCCAAATGAGAACCCGGAGGCCGAGCTGCCCCTCACGGCGGGGAAGTACCTCTACGTCTATGGAGACATGGACGAGGACGGCTTCTATGAAGGCGAGCTCCTGGACGGGCAGAGGGGCCTGGTGCCCTCCAACTTCGTGGATTTTGTCCAGGACGGGTCTCGGCTGGCAAGCACTCTGGGGAAAGACCAGGATCAGAGCGTCATCAGCCATGCCGGCGTCGGCTCGGAAGGGGAGCACATCCTGGACCTCCACTCCCCGACGCACGCGGACTCCGGCCTCTCCGACCACGGGGCGGGGACGCGGGATGTGAACATCGATGACGTCGGAGAAGACACCGTGCCTTACCCTCGGAAAATCACCCTCATCAAACAACTTGCCAAAAGTGTCATCGTGGGCTGGGAGCCTCCGGCGGTGCCCCCGGGCTGGGGGGCTGTGAGCAGCTACAACGTGCTGGTGGATGCAGAGACGCGCCTGAGCCTGGCGCCGGGTGGCAGGACCAAGGCCCTGGTGGAGAAGCTGAACATGGCAGCCTGCACCTACCGCATCTCCGTGCAGTGCGTCACCAGCCGGGGCAGCTCGGACAAGCTGCGCTGCACGCTGCTGGTGGGCAAGGACGTGGTGGTGGCGCCGTCCCACCTGCGCGTGGACAGCATCACGCAGGTCTCCGCCCGGCTCTCCTGGGCGCCCGCCAACAGCAACTACAGCCACGTCATCTTCCTCAACGAGCAGGAGCTGGACGTGGTCCGGGCCGCCAGCTACAAGTACCAGTTCTGCAACCTCAGGCCCAACGCGGCTTACAAGGTGAAGGTCCTGGCCAAGCCCCACCAGATGCCCTGGCAGCTGCCCCTAGAGCAGAGGGAGAGGAAGGAGGCCTTCGTGGAGTTCTCCACGCTGCCGGCAGGTCCTCCCGCCCCGCCCCAGGACATTGCCGTCCAGGCCACGGCCACCCCAGGCACCGTCCAGGTCTCCTGGAAGCCGCCCGCCCTGACGGCCACGGGGCTGTCCAATGGAGCCAACGTCACCGGCTACGGCGTGTATGCCAACGGGCAGAGGGTAGCTGAGATCATCTCTCCCACGGCGGACGGCACGGCCGTGGAGCTGGTGCGGCTGCGGAGCCTCGAAGCCAAGAGCGTGACCGTGCGGACCCTCTCCGCCCAGGGCGAGTCCGTAGACTCTGCCGCCGCTGCCATCCCCCCCGACCTCCTGGTGCCTCCTGCCCCCCACCTGAGAACTGCTCCCACACCGAAGCCATTAGCAAGTGCCGGAGCCCCCGATACCAAAGATGAACACCTGGGTCCGCACGCCGCGGCGGATGAGGCCTGGGAGCTCGGCCGGGCGCCTGCTCCGGCCCACGGGCACCTGCTGGAGCCGCCCGGCCTGCAAGACTCAGGCCCGGGGCGGCGGTCGCCCTCGCCCAGCCGCATCCTTCCGCAGCCGCAGGGCGTCCCGGTCTCCACCTCCGTCGCCAAGGCCATGGCCCGGGAAGCCGCGCAGAGGGTGGCCGAGAGCAGCAGGCTAGAGAAAAGGAGCATCTTCCTGGAGAGGAGCAGTGGGCAGTACGCAAACTCGGACGAGGAAGATGGCTACGAGTCCCCCGACGTCAAGAGGAGGGGCGCGTCGGTGGACGAGTTTCTGAAAGGCTCGGAGCTGGGCAAGCCGCCGCACTGTTGCCACGGAGACGAGTACCACACGGAGAGCAGCCGGGGGTCCGACCTCTCGGACATCATGGAGGAGGACGAGGAGGAGCTCTACTCTGAGATGCAGCTGGAGGACGGGGGCCGGAGGCGGCCCAGCGGCACGTCCCACAATGCCCTCAAGGAATGCTCTAAGAATAGGACCACTGAACGTGCTTTCTTGGAGCTGCCCGAGTATCCCCAGCAGACTCACCACAGTAAGAAGCTTTTCAGTATCCCCGAAGTAGCCGAGGAGGATGGAGAGCCCTGTGAGTTCTCGTACAAGCAGGGCTTAGGGGTCTCCTCCAGGGCCCGGACCCGGCTGGCCAGAGAGCCCAGGCCCACCAGGCCCTGCAGGGGGCACGAGGCCCCGCTTGGCTCCCGGGTCCCTGCGAAACCCAGGGCCCCCCGGGCCGAGGACTTCGTGTTCGAAGACAGAGGCTGTCGGTTCAGCCACTCGGCCACCAGGAGCCCGGACAGCGGCCTAGACTGTGGGAGCGAAGAGGAGGAGACGCGGTTTAGTTTCAGAAGCCCCGCTGCCAAGTGCAGCCCCGGCCCCGGGCACTGTCCCTGCAGGACGAGCCTGAGGCCCCTGCTGGCCCGGCGCCGGACGCTGACCCGGCAGAGCAGCATCGAGGAAGATTCTGGGGAGCCAGTGGAGGCCGGCCATGTCGTCAGGAGCAATGAGGCCCAGCCGAGCCCGGAGAGGTCCACCCCCAGCAAGTACAGCTGGGACGAGCCCGGGGGCCATGAGGATTTCCGGGATGTCTGGAAGAAAAGCATAAAAATAACATTTGCTCCTGTCATGCTGAACTTTTCCATGAAAACACAGATTTTAGGAAACCCGGTGACTGCTGGACGGGCTGATCGGGTGGATCTTGTGGGCCGGAGGTTTCCCCACGGCAGTGCTGGCCGCCACAGGTCCCGGCCAACGATGGTCCCGTCTGCCGATGAGTACGGTGGACGGAACCGGCTTTCTCCAGACTTCTACGAAGGGTCAGAGACGGACCCTGGGGCAGAAGAGCTCCCGCCCCGGATCTTTGTGGCTCTTTTTGACTACGACCCCCTCACCATGTCCCCGAACCCAGATGCTGCGGAAGAGGAGCTTCCCTTTAAAGAAGGGCAGATCATCAAGGTTTACGGTGATAAAGATGCTGATGGATTCTACCGTGGGGAAACCTGTGCTCGGCTTGGCCTTATTCCTTGTAACATGGTCTCTGAAATCCAGGCAGACGATGAGGAGGTGATGGACCAGCTTCTCAGACAAGGCTTCCTCCCCCTGAACACACCTGTGGAGAAAATAGAGAGAAACAGAAGAAGCAGCCGGCAGCGCTCGGTGGCGACGCGGAGGATGGTGGCCCTGTACGACTACGACCCAAGGGAGAGCTCGCCCAACATCGATGTCGAGGCTGAACTTACATTTTGCACTGGAGATATTATTACTGTTTTTGGTGAAATTGATGAAGATGGATTTTATTATGGGGAGCTTAATGGGCAGAAAGGCCTCGTACCCTCCAACTTCCTAGAAGAAGTGCCTGATGATGTAGAAGTCTATCTTTCTGACGCGCCGTCCCACTACCCGCAGGACACGCCGACACGCTCGAAGACGAAAAGGAAGAAGAGTGTGCATTTCACCCCTTAA

Related Sequences

bmy_17973T0 SequenceType object (3)

Length: 1285 aa      View alignments
>bmy_17973T0
MREAAERRQQLELEHEQALAVLNAKQQEIDLLQKCRVRELEEKCRAQGEQFSLLSRDLEQLRQHAGESDLLGGSSLDVPASPGKPFRRFVNGLAPSIGKGQESTIGSRAVIGEYIRPLPLPGDKPEPLSVKPAFLSRSGGPRCRFESDMDNERNSNTAKQRYSGKVHLCVARYSYNPFDGPNENPEAELPLTAGKYLYVYGDMDEDGFYEGELLDGQRGLVPSNFVDFVQDGSRLASTLGKDQDQSVISHAGVGSEGEHILDLHSPTHADSGLSDHGAGTRDVNIDDVGEDTVPYPRKITLIKQLAKSVIVGWEPPAVPPGWGAVSSYNVLVDAETRLSLAPGGRTKALVEKLNMAACTYRISVQCVTSRGSSDKLRCTLLVGKDVVVAPSHLRVDSITQVSARLSWAPANSNYSHVIFLNEQELDVVRAASYKYQFCNLRPNAAYKVKVLAKPHQMPWQLPLEQRERKEAFVEFSTLPAGPPAPPQDIAVQATATPGTVQVSWKPPALTATGLSNGANVTGYGVYANGQRVAEIISPTADGTAVELVRLRSLEAKSVTVRTLSAQGESVDSAAAAIPPDLLVPPAPHLRTAPTPKPLASAGAPDTKDEHLGPHAAADEAWELGRAPAPAHGHLLEPPGLQDSGPGRRSPSPSRILPQPQGVPVSTSVAKAMAREAAQRVAESSRLEKRSIFLERSSGQYANSDEEDGYESPDVKRRGASVDEFLKGSELGKPPHCCHGDEYHTESSRGSDLSDIMEEDEEELYSEMQLEDGGRRRPSGTSHNALKECSKNRTTERAFLELPEYPQQTHHSKKLFSIPEVAEEDGEPCEFSYKQGLGVSSRARTRLAREPRPTRPCRGHEAPLGSRVPAKPRAPRAEDFVFEDRGCRFSHSATRSPDSGLDCGSEEEETRFSFRSPAAKCSPGPGHCPCRTSLRPLLARRRTLTRQSSIEEDSGEPVEAGHVVRSNEAQPSPERSTPSKYSWDEPGGHEDFRDVWKKSIKITFAPVMLNFSMKTQILGNPVTAGRADRVDLVGRRFPHGSAGRHRSRPTMVPSADEYGGRNRLSPDFYEGSETDPGAEELPPRIFVALFDYDPLTMSPNPDAAEEELPFKEGQIIKVYGDKDADGFYRGETCARLGLIPCNMVSEIQADDEEVMDQLLRQGFLPLNTPVEKIERNRRSSRQRSVATRRMVALYDYDPRESSPNIDVEAELTFCTGDIITVFGEIDEDGFYYGELNGQKGLVPSNFLEEVPDDVEVYLSDAPSHYPQDTPTRSKTKRKKSVHFTP*