Sequence detailsbmy_17997 (Coding sequence)

Part of scaffold_1623 (SequenceType object (1))

For more information consult the page for scaffold_1623 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ST8SIA5ENSTTRG00000014069 (Bottlenosed dolphin)

Gene Details

ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000013343, Bottlenosed dolphin)

Protein Percentage 92.44%
cDNA percentage 94.38%
Ka/Ks Ratio 0.46175 (Ka = 0.0522, Ks = 0.1131)

ST8SIA5ENSBTAG00000001770 (Cow)

Gene Details

alpha-2,8-sialyltransferase 8E

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000002317, Cow)

Protein Percentage 82.11%
cDNA percentage 84.56%
Ka/Ks Ratio 0.16875 (Ka = 0.1192, Ks = 0.7063)

ST8SIA5 (Minke Whale)

Gene Details

ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5

External Links

Gene match (Identifier: BACU017647, Minke Whale)

Protein Percentage 92.89%
cDNA percentage 94.91%
Ka/Ks Ratio 0.57477 (Ka = 0.0489, Ks = 0.0851)

Additional orthologs identified in other species via the OPTIC pipeline.

ST8SIA5 (Human)  

Genome Location

Sequence SequenceType object (2)

Length: 1149 bp    Location:254132..189030   Strand:-
Raw sequence 
>bmy_17997
ATGCGCTACGCGGACCCCTCGGCGAACCGGGATTTGTTGGGGAACCGAACTTTGCTCTTCATCTTCATCTGCGCCTTCGCCTTGGTGACCTTGCTGCAACAGATCTTGTATGGCAGGAACTACATCAAGAGAGGTCTCCAGTTTGGTTGGCAGAGTGGTGATCAGCTGGCCAATTGGACGGGGATCTTTAATGTCATGGACGACCCAGCAGTGCAGAGTGGCAGTGACTCCAGCTCCAGGTACTTTGAATTTTACGAGGGCCCTTTTGAGTATAACTCCACGAGATGCCTGGAGCTGAGGCACGAGATCTTGGAAGTGAAGGTGCTTTCCATGGACCTCAGTTCCATGACCCCTCTGTTCTCTGAGAGGCTCTGCTCTGCCCTGTGTCACTGGTCTCTCTCCGTCTATCTCCTGCCCGGCAGGTCCACTCTGTCCAGGTGCTGCAATGCCCCCTCCTTCCTCTTCACCACCCAGAAGAACACGCCCCTGGGGACGAAACTCAAGTATGAGGTGGACACCAGCGGCATCTACCACATCAACCGGGAGATCTTCCACATGTTTCCCAAGGACATGCCCTACTACCGGTCCCAATTTAAGAAATGTGCCGTGGTGGGCAATGGGGGCATCCTAAAGAACAGCCGCTGCGGGAGGGAGATCAACAGCGCCGACTTTGTCTTCCGGTTCCACAAGCTGGAGAAGTGGCGGCGGCCCTTCTACCGGGTGCTGCAGGTGTACGAGAACGCGTCCGTGCTGCTGCCTGCATTCTACAACACGCGCAACACCGACGTGTCCATCCGCGTCAAGTACGTGCTGGACGACTTCGAGTCGCCGCAGGCCGTGTACTACTTCCACCCGCAGTACCTGGTCAACGTGTCGCGCTACTGGCTCAGCCTCGGGGTGCGCGCCAAGCGCATCAGCACCGGCCTCATCCTGGCCACGGCGGCGCTGGAACTGTGCGAGGAGGTGCACCTGTTCGGCTTCTGGGCCTTCCCCATGAACCCCTCGGGCCTCTCCATCACCCACCACTACTACGACAACGTCAAGCCCCGCCCGGGCTTCCACGCCATGCCCTCCGAGATCTTCAACTTCCTGCACCTGCACAGCCGCGGCATCCTGCGCGTGCACACGGGCACCTGCAACTGCTGCTGA

Related Sequences

bmy_17997T0 SequenceType object (3)

Length: 383 aa      View alignments
>bmy_17997T0
MRYADPSANRDLLGNRTLLFIFICAFALVTLLQQILYGRNYIKRGLQFGWQSGDQLANWTGIFNVMDDPAVQSGSDSSSRYFEFYEGPFEYNSTRCLELRHEILEVKVLSMDLSSMTPLFSERLCSALCHWSLSVYLLPGRSTLSRCCNAPSFLFTTQKNTPLGTKLKYEVDTSGIYHINREIFHMFPKDMPYYRSQFKKCAVVGNGGILKNSRCGREINSADFVFRFHKLEKWRRPFYRVLQVYENASVLLPAFYNTRNTDVSIRVKYVLDDFESPQAVYYFHPQYLVNVSRYWLSLGVRAKRISTGLILATAALELCEEVHLFGFWAFPMNPSGLSITHHYYDNVKPRPGFHAMPSEIFNFLHLHSRGILRVHTGTCNCC*