Part of scaffold_1675 (Scaffold)

For more information consult the page for scaffold_1675 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CLNS1A ENSTTRG00000007062 (Bottlenosed dolphin)

Gene Details

chloride channel, nucleotide-sensitive, 1A

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006678, Bottlenosed dolphin)

Protein Percentage 98.73%
cDNA percentage 98.59%
Ka/Ks Ratio 0.24401 (Ka = 0.0069, Ks = 0.0284)

CLNS1A ENSBTAG00000019930 (Cow)

Gene Details

methylosome subunit pICln

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000026551, Cow)

Protein Percentage 97.47%
cDNA percentage 95.78%
Ka/Ks Ratio 0.07678 (Ka = 0.0116, Ks = 0.1512)

CLNS1A  (Minke Whale)

Gene Details

chloride channel, nucleotide-sensitive, 1A

External Links

Gene match (Identifier: BACU012509, Minke Whale)

Protein Percentage 92.41%
cDNA percentage 93.11%
Ka/Ks Ratio 0.63317 (Ka = 0.065, Ks = 0.1027)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 813 bp    Location:169649..150556   Strand:-
>bmy_18041
CAAAGATTTTGCTCTTCCGGGGTAATTGTTACCGCTTCCGGGTCGGGACGCGGCGAGCGGAGTTTGCTGTTAATTCGTGTTTCTGCGCTCCTTGTTGCAATGAGCTTTCTCAAAAGTTTCCCGCCGCCTGGGTCGGCTGAGGGGCTCCGGCAGCAGCAGCCAGATACTGAGGCCGTGCTGAACGGGAAAAGCCTCGGCACCGGCACCCTTTATATCGCTGAGAGCCGCCTGTCTTGGTTAGATGGCTCTGGATTAGGATTCTCACTGGAATACCCCACCATTAGTTTGCATGCGGTATCCAGGGACCTAAATGCCTATCCACGAGAGCATTTGTATGTTATGGTGAACGCCAAATTTGGAGAAGAATCAAAAGAATCTGTTGCTGATGAAGAAGAGGAAGACAGTGATGATGATATTGAACCTATTGCTGAATTTAGATTTGTGCCTAGTGATAGATCAGCCTTGGAGGCCATGTTCACTGCAATGTGTGAATGCCAGGCTTTGCATCCAGATCCTGAGGATGAAGATTCAGATGATTACGATGGAGAAGAATATGATGTGGAAGCACATGAACAAGGGCAGGGGGACATCCCTACATTTTATACCTATGAAGAAGGATTATCCCATTTAACAGCAGAAGGCCAAGCCACACTGGAGAGATTAGAAGGAATGCTTTCTCAGTCTGTAAGCAGCCAGTATAACATGGCTGGAGTCCGGACAGAAGATTCAATAAGAGATTATGAAGATGGGATGGAGGTAGATACTACACCAACAGTTGCTGGACAGTTTGAGGATGCAGATGTTGATCACTGA

Related Sequences

bmy_18041T0 Protein

Length: 271 aa      View alignments
>bmy_18041T0
QRFCSSGVIVTASGSGRGERSLLLIRVSALLVAMSFLKSFPPPGSAEGLRQQQPDTEAVLNGKSLGTGTLYIAESRLSWLDGSGLGFSLEYPTISLHAVSRDLNAYPREHLYVMVNAKFGEESKESVADEEEEDSDDDIEPIAEFRFVPSDRSALEAMFTAMCECQALHPDPEDEDSDDYDGEEYDVEAHEQGQGDIPTFYTYEEGLSHLTAEGQATLERLEGMLSQSVSSQYNMAGVRTEDSIRDYEDGMEVDTTPTVAGQFEDADVDH*