Sequence detailsbmy_18063 (Coding sequence)

Part of scaffold_1658 (SequenceType object (1))

For more information consult the page for scaffold_1658 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

IRBPENSTTRG00000013423 (Bottlenosed dolphin)

Gene Details

Interphotoreceptor retinoid binding protein

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000012733, Bottlenosed dolphin)

Protein Percentage 97.99%
cDNA percentage 97.35%
Ka/Ks Ratio 0.07852 (Ka = 0.007, Ks = 0.0894)

BT.56277ENSBTAG00000005003 (Cow)

Gene Details

retinol-binding protein 3 precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000006585, Cow)

Protein Percentage 91.45%
cDNA percentage 91.16%
Ka/Ks Ratio 0.1256 (Ka = 0.0429, Ks = 0.3414)

RBP3 (Minke Whale)

Gene Details

retinol binding protein 3, interstitial

External Links

Gene match (Identifier: BACU007617, Minke Whale)

Protein Percentage 97.98%
cDNA percentage 97.87%
Ka/Ks Ratio 0.17629 (Ka = 0.011, Ks = 0.0621)

Additional orthologs identified in other species via the OPTIC pipeline.

RBP3 (Human)   Rbp3 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 3861 bp    Location:407249..418800   Strand:+
Raw sequence 
>bmy_18063
ATGTCAAGAAAATGGGCCCTGCTCTTGCCCATGCTGCTCTGCAGCCTGGCTGGCCCTACACACCTATTCCAGCAGAGCCTGGTGCTGGACATGGCCAAGGTCCTCTTGGATAACTACTGCTTCCCAGAGAACCTGATGGGGATGCAGGAAGCCATCGAGCAGGCCATCAAGAGTCATGAGATCCTGGCCATTTCAGACCCTGAGACTCTGGCCCATGTGCTGACAGCTGGCGTGCAGAGCTCCTTGAACGACCCTCGYCTGGTCATCTCCTATGAGCCCAGCACCCTCGAGGCTCCCCGGCAAGCCCCAGCACTCATGAACCTCACGCTAGAGGAACTCATTGCGGGGCTGCAGAACGGCCTCCGCCATGAGGTTCTGGAAGGCAATGTGGGCTACCTGCGGGTGGACGACATCCCGGGCCAGGAGGTGATGAGCAAGCTGAGGAGCTTCCTGGTGGCCAACGTCTGGAGGAAGCTCATGGGCACCTCCGCCTTGGTGCTGGACCTCCGCCACTGCACTGGGGGCCACATTTCCGGCATCCCCTATGTCATCTCCTACCTGCACCCAGGGAACACAGTCCTGCACGTGGACACCATCTATGATCGCCCCTCTAATACGACCACTGAGATCTGGACCCTGCCCGAAGTCCTAGGAGAGAACTACGGTGCCGATAAGGATGTGGTGGTCCTCACCAGTGGTCGCACCGGGGGTGTGGCTGAGGACATCGCTTATATCCTCAAACAAATGCGCAGGGCCATTGTGGTGGGCGAGCGGACTGTGGGGGGGGCCTTGGACCTCCAGAAGCTGCGGATAGGCCAGTCTGACTTCTTTCTCACCGTGCCCGTGTCCAGGTCCCTGGGGCCCCTGGGCAAGGGCAGCCAGACTTGGGAGGGCAGCGGGGTGCTGCCTTGTGTGGGGACACCGGCCGAGCAGGCCCTGGAGAAGGCCCTGGCCATCCTCACGCTGCGCCGCGCCCTGCCGGGAGTCATCCAGCGCCTGCAGGAGGCCCTGCGGGAATACTACACACTGGTGGACCGCGTGCCTGCCCTGCTGCACCACCTGGCCAACATGGACCTGTCCTCGGTGGTCTCCGAGGAGGATCTGGTCACTAACCTCAACACCGGCCTGCAGGCCGTGTCCGAGGACCCCAGGCTCCTGGTGCAGGTGGTCAGGTCCAAAGAAACCTCTTCTGGGCCCGAGGATGAAGCTGAAGAACCCTCGGAGATGGTCTCAGAAGTGCCCGAGGACGAGGCTGCCCGGCGGGCCCTGGTGGACTCCGTGTTCCAGGTGTCCGTGCTGCCGGGCAACGTGGGCTACCTGCGCTTTGACAGGTTTGCCGACGCCTCAGTGCTGGGGGTGCTGGCCCCGTACATCCTGCGCCAGGTGTGGGAGCCCCTGCAGGACACGGAGCACCTCATCATGGACCTGCGGCAGAACCCTGGGGGGCCGTCCTCTGCCGTGCCCCTGCTGCTCTCCTATTTCCAGGGACCCGACTCCGGCCCCGTGCGTCTCTTCACCACCTACGACCGGCGCACCAATGTCACGCAGGAGCACTTCAGCCAGACCGAGCTGCTGGGCCAGCCATACGGCACCCAGCGCGGGGTGTACCTGCTCACCAGCCACCGCACCGCCACCGCAGCCGAGGAGCTGGCCTTCCTCATGCAGTCGCTCGGCTGGGCCACGCTGGTGGGCGAGATCACGGCGGGCAGCCTGCTGCACACGCACACGGTGCCCCTGCTGGAGACGCCCGAGGGCGGCCTGGCGCTCACGGTGCCCGTGCTCACCTTCATCGACAACCATGGCGAGTGCTGGCTGGGGGGCGGCGTGGTCCCCGATGCCATCGTGCTGGCTGAGGAAGCCCTGGACAGAGCCCAGGAGGTGCTGGAGTTCCACCGAAGCCTGGGGGAGCTGGTGGAGGGCACGGGGCACCTGCTGGAGGCCCACTATGCCCGGCCAGAGGTCGTGGGGCAGACAGGCGCCGTGTTGCAAGCCAAGCTGGCCCAGGGCGCCTACCGCACAGCAGTGGACCTGGAGTCGCTGGCCTCCCAGCTCACGGCAGACCTGCAGGAGATGTCTGGAGACCACCGTCTGCTGGTGTTCCACAGCCCCGGCGAGATGGTGGCTGAGGAAGTGCCCCTACCACCTCCCATCGTCCCCTCCCCAGAGGAGCTCTCCTACCTCATCGAGGCCCTGTTCAAGACAGAGCTGCTGCCRGGCCGGCTGGGCTACCTGCGTTTCGACGCCATGGCTGAGCTGGAGACGGTGAAAGCCATCGGGCCACAGCTGGTACAGCTGGTATGGCAGAAGCTGGTAGACACACCCGCGCTGGTGGTCGACCTGCGCTACAACCCCGGCAGCTACTCCACGGCCGTGCCGCTGCTCTGTTCCTACTTCTTCGAGGCAGAGCCCCGCCAGCACCTCTACTCCGTCTTTGACAGGGCCATGTCGAGAGTCACAGAGGTGTGGACCCTGCCCCAGGTGGCAGGCCAGCGCTACGGCTCCCACAAGGACCTCTACATCCTGGTGAGCCACACCAGTGGGTCGGCGGCTGAAGCTTTCGCTCACACCATGCAGGACCTGCAGCGTGCCACCATCATCGGGGAGCCCACGGCTGGAGGGGCGCTCTCCGTGGGCATCTACCAGGTGGGCAGCAGCCCCTTATATGCCTCCATGCCCACGCAGATGGCCCTGAGTGCCAGCACCGGTGAGGCCTGGGACCTGGCTGGGGTGGAGCCAGACATCACCGTGCCCATGAGTGTGGCCCTCTCCACAGCCCAGGACATAGTGGCCCTGCGTGCCAAGGTGCCCACTGTGCTGCAGACAGCTGGGAAGCTCGTAGCAGATAACTATGCCTCCCCCGAGCTGGGAGCCAAGATGGCATCCAAACTGAGCCGTCTGCAGAGCCGCTATGCCAGGGTGACATCAGAAGCTGCCCTGGCCGAGATGCTGGAGGCTGACCTGCAGGTGCTGTCCGGGGACCCACACCTGAAGACAGCCCATATCCCTGAGGATGCCAAGGACCGCATTCCTGGCATTGTACCCATGCAGATCCCTTCCCCTGAAGTCTTTGAAGACCTGATCAAGTTTTCCTTCCACACTAATGTGCTTGAGGGCAACGTTGGCTACTTGAGGTTTGATATGTTTGGAGACTGTGAGCTGCTCACCCAGGTCTCCGAGCTGCTGGTGGAGCATGTCTGGAAGAAGATTGTACACACAGACGCCCTGATTGTCGACATGAGGTTCAACATCGGTGGTCCCACCTCCTCCATCTCCGCCATATGTTCCTACTTTTTCGACGAAGGCCCACCTATTCTGCTGGACAAAATCTACAACCGGCCCAATGACTCTGTCAGCGAGCTCTGGACCCACGCGCAGCTCGAAGGTGAACGCTACGGCTCCAAGAAGAGTATGGTCATTCTGACCAGCAGTTTGACAGCTGGCGCCGCAGAGGAATTTACCTACATCTTGAAGAGGCTGGGCCGGGCACTGGTCATCGGGGAGGTGACCAGTGGGGGCTGCCAGCTGCCGCAAACCTACCACGTGGATGACACCGACCTGTACATCACCATCCCCACTGCCCGCTCAGTGGGGGCTGCAGACGGCAGCTCCTGGGAAGGGGTGGGCGTGGTGCCTGACGTGGCTGCCCCTGCAGAAGCAGCCCTCGCCAGAGCCAAGGAGGTGCTCCAGCACACTCTGCTAAGGGCGAGGCGGAGCCCACGCCTGCACGGCCGCCGCAAGGGCCACCGTAGTCAGAGCCATAAAAGGGCGGGACCTCTGGGACACATCCAAGGGACACCCAGGCATGAGGTCCTGACTGAGGCCCCCAAAGGGCAGAAAACGGGCCTGCTGCCCTCTGGTTAG

Related Sequences

bmy_18063T0 SequenceType object (3)

Length: 1287 aa      View alignments
>bmy_18063T0
MSRKWALLLPMLLCSLAGPTHLFQQSLVLDMAKVLLDNYCFPENLMGMQEAIEQAIKSHEILAISDPETLAHVLTAGVQSSLNDPRLVISYEPSTLEAPRQAPALMNLTLEELIAGLQNGLRHEVLEGNVGYLRVDDIPGQEVMSKLRSFLVANVWRKLMGTSALVLDLRHCTGGHISGIPYVISYLHPGNTVLHVDTIYDRPSNTTTEIWTLPEVLGENYGADKDVVVLTSGRTGGVAEDIAYILKQMRRAIVVGERTVGGALDLQKLRIGQSDFFLTVPVSRSLGPLGKGSQTWEGSGVLPCVGTPAEQALEKALAILTLRRALPGVIQRLQEALREYYTLVDRVPALLHHLANMDLSSVVSEEDLVTNLNTGLQAVSEDPRLLVQVVRSKETSSGPEDEAEEPSEMVSEVPEDEAARRALVDSVFQVSVLPGNVGYLRFDRFADASVLGVLAPYILRQVWEPLQDTEHLIMDLRQNPGGPSSAVPLLLSYFQGPDSGPVRLFTTYDRRTNVTQEHFSQTELLGQPYGTQRGVYLLTSHRTATAAEELAFLMQSLGWATLVGEITAGSLLHTHTVPLLETPEGGLALTVPVLTFIDNHGECWLGGGVVPDAIVLAEEALDRAQEVLEFHRSLGELVEGTGHLLEAHYARPEVVGQTGAVLQAKLAQGAYRTAVDLESLASQLTADLQEMSGDHRLLVFHSPGEMVAEEVPLPPPIVPSPEELSYLIEALFKTELLPGRLGYLRFDAMAELETVKAIGPQLVQLVWQKLVDTPALVVDLRYNPGSYSTAVPLLCSYFFEAEPRQHLYSVFDRAMSRVTEVWTLPQVAGQRYGSHKDLYILVSHTSGSAAEAFAHTMQDLQRATIIGEPTAGGALSVGIYQVGSSPLYASMPTQMALSASTGEAWDLAGVEPDITVPMSVALSTAQDIVALRAKVPTVLQTAGKLVADNYASPELGAKMASKLSRLQSRYARVTSEAALAEMLEADLQVLSGDPHLKTAHIPEDAKDRIPGIVPMQIPSPEVFEDLIKFSFHTNVLEGNVGYLRFDMFGDCELLTQVSELLVEHVWKKIVHTDALIVDMRFNIGGPTSSISAICSYFFDEGPPILLDKIYNRPNDSVSELWTHAQLEGERYGSKKSMVILTSSLTAGAAEEFTYILKRLGRALVIGEVTSGGCQLPQTYHVDDTDLYITIPTARSVGAADGSSWEGVGVVPDVAAPAEAALARAKEVLQHTLLRARRSPRLHGRRKGHRSQSHKRAGPLGHIQGTPRHEVLTEAPKGQKTGLLPSG*