Part of scaffold_1687 (Scaffold)

For more information consult the page for scaffold_1687 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SMPDL3B ENSTTRG00000007509 (Bottlenosed dolphin)

Gene Details

sphingomyelin phosphodiesterase, acid-like 3B

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007103, Bottlenosed dolphin)

Protein Percentage 78.57%
cDNA percentage 81.8%
Ka/Ks Ratio 0.58526 (Ka = 0.0666, Ks = 0.1138)

SMPDL3B ENSBTAG00000012997 (Cow)

Gene Details

acid sphingomyelinase-like phosphodiesterase 3b precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000017279, Cow)

Protein Percentage 88.51%
cDNA percentage 88.97%
Ka/Ks Ratio 0.16317 (Ka = 0.0641, Ks = 0.3931)

SMPDL3B  (Minke Whale)

Gene Details

sphingomyelin phosphodiesterase, acid-like 3B

External Links

Gene match (Identifier: BACU003255, Minke Whale)

Protein Percentage 95.17%
cDNA percentage 95.94%
Ka/Ks Ratio 0.33683 (Ka = 0.0304, Ks = 0.0903)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1335 bp    Location:129230..114563   Strand:-
>bmy_18069
ATGGTGGAGACCCAGGGTTCCCTTGACTCCCTCCACATCCAGGCTCAGGGAGAGACCTGCATTGAGCAGGGTCTCCTTGCCCCTGCAGGGAAGTTCTGGCACGTCTCTGACCTGCACCTTGACCTGGACTACAAGGTGTCTGAAGACCCCCTCCAGGTGTGCCCATCCGCTGGCTCCCAGCCGGTGCCCAATGCAGGCCCCTGGGGCAACTACCTCTGCGATTCTCCCTGGATCCTCATCAACTCCTCTATCTACGCCATGAAGGAGATCGAGCCAGAGCCAGACTTCATCTTCTGGACTGGTGATGACACGCCCCACGTGCCCAACGAGAACCTGGGAGAGGCGGCCGTGCTGCAAATTGTGGAGAACCTGACCGAGCTCATCAGAAAGGCCTTTCCAGATACTAAAGTCTATGCTGCTTTGGGAAATCATGACTTTCACCCCAAAAACCAGTTCCCGGCCGGAAGCAACAATATCTACAATCAGGTAGCAGAGCTGTGGCGACCCTGGCTCAGTGCCTTCTATTCTGAGAAACTGCCGGGGCCAAGCGCAGCTGGGCGAATCGTGGTCCTCAACACCAATCTGTACTATAGCAACAACCAGCAGACGGCCGGCATGGCCGACCCTGGCCAGCAGTTCCAGTGGCTGGACGATGTGCTGACCAATGCGTCCCGAGCTGGGGAAATGGTGTACATTATCGGCCATGTGCCCCCGGGGTTCTTTGAGAAGACGCGGAACAAAGCGTGGTTCCGGGAGGGCCCCAACCAGGAGTACCTGAAGGTGGTCCGGAAGCATCATCGAGTCATTGCAGGGCAGTTCTTCGGGCACCACCACACCGACAGCTTTCGGATGTTCTACGATGATGCAGGTACCCCCATCAGTGTCATGTTCCTTACACCTGGGGTCACCCCATGGAAAACCACGTTACCTGGAGTGGTCAACGGAGCCAACAATCCAGGCATCCGGGTGTTTGAATACGACCGAGCCACACTGAGCCTGCAGGCGAACGCGCAGGGGGCGCCGCGCTGGGAGCTCGAGTACCGGGTGACCAAAGCCTACGGCGTGCCCGACGCAGGCGCCCGCTCTATGCACGAGGCGCTGGGCCGCATCGCCAGCGACCAGGGCGCGCTGCAGCGCTACTACGTCTACAACTCGGTCAGTTACGACACGCGGGCCTGCGACGAGGCCTGCCAAGCCGAGCACGTGTGCGCGCTGCGCGAAGTAGCCTTCGACGGGTATGCCGCCTGCCTGCGCGCCCCCGGCGTCGCGCCCGCGCCCCGCCTCGCGCTCCTGCTGGTGGCGCTGCTGGGCCTGCGCACGCTGCTTGTGTCGTGA

Related Sequences

bmy_18069T0 Protein

Length: 445 aa      View alignments
>bmy_18069T0
MVETQGSLDSLHIQAQGETCIEQGLLAPAGKFWHVSDLHLDLDYKVSEDPLQVCPSAGSQPVPNAGPWGNYLCDSPWILINSSIYAMKEIEPEPDFIFWTGDDTPHVPNENLGEAAVLQIVENLTELIRKAFPDTKVYAALGNHDFHPKNQFPAGSNNIYNQVAELWRPWLSAFYSEKLPGPSAAGRIVVLNTNLYYSNNQQTAGMADPGQQFQWLDDVLTNASRAGEMVYIIGHVPPGFFEKTRNKAWFREGPNQEYLKVVRKHHRVIAGQFFGHHHTDSFRMFYDDAGTPISVMFLTPGVTPWKTTLPGVVNGANNPGIRVFEYDRATLSLQANAQGAPRWELEYRVTKAYGVPDAGARSMHEALGRIASDQGALQRYYVYNSVSYDTRACDEACQAEHVCALREVAFDGYAACLRAPGVAPAPRLALLLVALLGLRTLLVS*