Part of scaffold_1687 (Scaffold)

For more information consult the page for scaffold_1687 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

THEMIS2 ENSTTRG00000007505 (Bottlenosed dolphin)

Gene Details

thymocyte selection associated family member 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007099, Bottlenosed dolphin)

Protein Percentage 91.51%
cDNA percentage 93.76%
Ka/Ks Ratio 0.52542 (Ka = 0.0383, Ks = 0.073)

C1ORF38 ENSBTAG00000006223 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000008171, Cow)

Protein Percentage 82.32%
cDNA percentage 88.32%
Ka/Ks Ratio 0.32032 (Ka = 0.0942, Ks = 0.294)

THEMIS2  (Minke Whale)

Gene Details

thymocyte selection associated family member 2

External Links

Gene match (Identifier: BACU003253, Minke Whale)

Protein Percentage 94.84%
cDNA percentage 96.71%
Ka/Ks Ratio 0.55034 (Ka = 0.0289, Ks = 0.0525)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1920 bp    Location:193462..178895   Strand:-
>bmy_18071
ATGGAGCCCGTGTCGCTGCAGGACTTCGTGTGCGCCCTGGACCCCGCCTGCCTCCCGCGTGTGCTGCGGGTCTGCTCGGGTGTCTACTTCCAGGGCTCCATCTATGAGATCTCTGGGAATGAGTGCTCCCTCTCCACAGGAGACCTGATCAAGGTCACCTGTGTTCGCCTCCAGAAGGTGGTCTGCGAGAACCCGGGGACGGGCCAGACCATGGAGCTCGCTCCCAACTTCCAGGGCAACTTCAGCCCCCTCACTGGCCCCCAGAGCTATGGAACCCTGGAGGAGCTGGTCTCTGCTGCAACCCAGAGCTCCAAGCAGCTGCCCATCTGCTTCATGTCGACCCACAGAATCACCACCAAGGCCAGGGTGGTGCCTCAGGAGCAGCCCCTCAAGCTTGAGGCTGTGGAAATGCACCTCGGGACCTGCTRTGCCCGCTGTGTGCTGGGCACCGGGGCCCAGCAGGTCCTTCTGCACCTGCCCCTGTCCCAGAAGGGGCCCTTCTGGGAACTGCAGCCTGGGCCCCCTCGGACTCTGCTCCAGGTGCTGCAGGACCCGGCCCTGAGGGACACCATCCTCACCTGCCCCGCCCTCCCCTGGCGCTCCCTGACCCTGATGCCCCAGTATGAGGTCGAAGCCATCATGCACTTGCGCAGGACCATCGTCAAGATCCCCTCCACCCTGGAGGTTGACGTGGAGGATATCACCGCCTCCTCTCAGCACATCCACTTCATGCAACCGCTGCTGCTGAGCGAGGCCCTGGCCCGGGGAGGCCCCTTCCCCCTGCCCACAGAGATCCTGGAAGTTCCGGAAGGGCCCCCCATCTTCCTCAGCCCGTGGCTGAGCTCCTTACAGAAGGGCCAGAGGCTCTGCATCTATGGCCTGGCCTCGCCACCCTGGCGGTTCCTGGCCTCAACCAAGGGCCGGAAAGTGCCCAGACACTTCATGATCTCCGGGGCCTACCAGGGCAAGCTGCGGCGGCGGCCGAGAGAGTTCCCCACGGCCTACGACCTCCTGGGTGCTCTCCAGCCAGGCCAGCCACTCCGAGTAGTGGCCACAAAGGACTGTGAAGGAGACGAGTTGGAGAACCCCGGGTTCATGTCCCTGGCCATGGGAGACAGGCTGGAGGTGTTGGGGTCTGGCCAGGCCCTTGGGGTTCAAGAGAGGGACATGGACGTCCTGGTGTGTCAGCGGCTGAGTGACCAGCCTGGGGATGAAGAGGAGTATGAAGAGGCAGAGGACCAAGAACAGATTCTGCTGCCCCTCCACCTCTCTGGCGGCTTCGTGGAAGAGTTGGGTGATGGCCGGCGCTACAGCCTGCAGGATCTGATTGCCCAGTTCTCACTGCCCTGTGAGGTCAAGGTGGTGACCAAGGACGCCAGCCACCCTGCTGACCCTCTGCCCTCCTTCCTGGGCCTGCGGCTGGAGGAGAAGATCATGGAACCCTTCTTGGTGGTCAGCCTGGACTCCAACCCTGAGATGTGCTTCGAGGTCCCTCCCCGGTGGCTGGACCTGACTGTCGTGGAAGCCGAGGGGCAGCCAAGCCAGCCGGCTGGGCCCCTCCCCGTAGTCCCAGTGGAGGAGCTGACAGAGGCCTTCTATTATCACCTTCGGAAGTCACCGGCCTTTGAGGGTCAAGCTCCTCCGCCCAGGCCTCCGAAAAGTAAGGGCCTCAGTGGGCAGAAGCAGCAGGTCAGCAAGGCGAAAGGTGTCAAGTCTTCTGAAGCCTTCCAATTGCAGAAACCATCTCTGCTGCCTAAACCCAAGAGGAAGACCTTGCCAAAGGTCACCAAGGACAGCTGCAATTTATACAGTAAGATTCCTGGTCACAAGAAGGGTCTCAGGCCCACTAAGCCCATCACTCAGGATACAGGAAACAATCAAGAATGGACATACTTGCAAATGAACATACTGGTTGACTGA

Related Sequences

bmy_18071T0 Protein

Length: 640 aa      View alignments
>bmy_18071T0
MEPVSLQDFVCALDPACLPRVLRVCSGVYFQGSIYEISGNECSLSTGDLIKVTCVRLQKVVCENPGTGQTMELAPNFQGNFSPLTGPQSYGTLEELVSAATQSSKQLPICFMSTHRITTKARVVPQEQPLKLEAVEMHLGTCXARCVLGTGAQQVLLHLPLSQKGPFWELQPGPPRTLLQVLQDPALRDTILTCPALPWRSLTLMPQYEVEAIMHLRRTIVKIPSTLEVDVEDITASSQHIHFMQPLLLSEALARGGPFPLPTEILEVPEGPPIFLSPWLSSLQKGQRLCIYGLASPPWRFLASTKGRKVPRHFMISGAYQGKLRRRPREFPTAYDLLGALQPGQPLRVVATKDCEGDELENPGFMSLAMGDRLEVLGSGQALGVQERDMDVLVCQRLSDQPGDEEEYEEAEDQEQILLPLHLSGGFVEELGDGRRYSLQDLIAQFSLPCEVKVVTKDASHPADPLPSFLGLRLEEKIMEPFLVVSLDSNPEMCFEVPPRWLDLTVVEAEGQPSQPAGPLPVVPVEELTEAFYYHLRKSPAFEGQAPPPRPPKSKGLSGQKQQVSKAKGVKSSEAFQLQKPSLLPKPKRKTLPKVTKDSCNLYSKIPGHKKGLRPTKPITQDTGNNQEWTYLQMNILVD*