Part of scaffold_1642 (Scaffold)

For more information consult the page for scaffold_1642 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TUB ENSTTRG00000016587 (Bottlenosed dolphin)

Gene Details

tubby homolog (mouse)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015724, Bottlenosed dolphin)

Protein Percentage 94.43%
cDNA percentage 95.49%
Ka/Ks Ratio 0.24707 (Ka = 0.0294, Ks = 0.1192)

TUB ENSBTAG00000004862 (Cow)

Gene Details

tubby protein homolog

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000006391, Cow)

Protein Percentage 94.25%
cDNA percentage 93.65%
Ka/Ks Ratio 0.09907 (Ka = 0.0258, Ks = 0.2608)

TUB  (Minke Whale)

Gene Details

tubby bipartite transcription factor

External Links

Gene match (Identifier: BACU020462, Minke Whale)

Protein Percentage 98.79%
cDNA percentage 98.52%
Ka/Ks Ratio 0.16097 (Ka = 0.0069, Ks = 0.0431)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1533 bp    Location:355788..335892   Strand:-
>bmy_18087
ATGACTTCCAAGCCGCATTCCGACTGGATTCCCTACAGTGTCTTAGATGATGAGGGCAGCAACCTGAGGCAGCAGAAGCTTGACCGGCAGCGGGCCCTGCTGGAGCAGAAGCAGAGGAAGAAGCGCCAGGAGCCCCTGATGGTGCAGGCCAACGCCGACGGGCGGCCCCGGAGCCGGCGGGCCCGGCAGTCGGAGGAGCAGGCCCCCCTGGTGGAGTCCTACCTCAGCAGCAGCGGCAGCGCCAGCTACCAAGTTCAGGAGGCCGACTCGCTTGCCAGTGTGCCACTGGGAGCTGCCCGCCCCACAGCACCAGCCTCAGCCTCAGCCTCAGCCAAGAGAACCAAGGCAGCTGCCGCAGCGGGGGGCCAGGGCGCGGCCTCTGGGAAGGAGAAGAAGGGGAGGCACAAAGGCACCGGCGGGCCAGCAGCACTGGCAGAAAACAAGTCCGAGGCCCGAGGCCCCATGCGGATCCTGACTGTGGGCCAGTCAGACCACGCCCGGGACGAGGAGGAGACAGCCGCTGGTGGGGGCACACGGCCCAGCGGGCAGGACATCCGTGCCACGATGCAGAGGAAGGGCGTCTCCAGCAGCGTGAGCTTCGAAGAGGAAGAGGAGGATGAGGACGAGGACAGCTCCAGCTCCTCCCAGCTGAACAGCAGCCCCCGCCCCAGCTCTGCGACGAGCAGGAAGTCCCTCAGGGAGGCAGCCTCAGCCCCCAGCCCCCCAGCCCCAGAGCCGTCGGTGGATGTTGAGGTTCAGGATCTTGAGGAGTTCGCCCTGAGGCCGGCCCCGCAGGGGATCACCATCAAGTGCCGCATCACACGGGACAAGAAGGGCATGGACCGGGGCATGTACCCCACCTACTTTCTGCACCTGGACCGCGAGGATGGGAAGAAGGTGTTCCTCCTGGCGGGAAGGAAGCGAAAGAAGAGTAAAACTTCCAATTACCTCATCTCTGTGGACCCAACAGACTTGTCTCGAGGAGGGGACAGCTACATCGGGAAACTGCGGTCCAACCTCATGGGCACAAAGTTCACCGTTTATGACAATGGAGTCAACCCTCAGAAGGCATCATCCTCTACTTTGGAAAGTGGAACCTTACGTCAGGAGCTGGCTGCTGTATGCTACGAAACAAATGTTTTAGGTTTCAAGGGGCCGCGGAAGATGAGTGTGGTTGTCCCAGGCATGACCATGGTTCACGAGAGAGTCTCTATCCGGCCCCGCAACGAGCACGAGACGCTGCTAGCACGCTGGCAGAATAAGAACACGGAGAGTATCATTGAGCTGCAGAACAAGACGCCTGTCTGGAATGACGACACACAGTCCTACGTACTCAACTTCCACGGGCGCGTCACTCAGGCCTCCGTGAAGAACTTCCAGATCATCCACGGCAATGACCCGGACTACATTGTGATGCAGTTTGGCCGYGTAGCGGAGGACGTGTTCACCATGGATTACAACTACCCATTGTGTGCGCTGCAGGCCTTTGCCATTGCCCTGTCCAGCTTCGACAGCAAGCTGGCCTGCGAGTAG

Related Sequences

bmy_18087T0 Protein

Length: 511 aa      View alignments
>bmy_18087T0
MTSKPHSDWIPYSVLDDEGSNLRQQKLDRQRALLEQKQRKKRQEPLMVQANADGRPRSRRARQSEEQAPLVESYLSSSGSASYQVQEADSLASVPLGAARPTAPASASASAKRTKAAAAAGGQGAASGKEKKGRHKGTGGPAALAENKSEARGPMRILTVGQSDHARDEEETAAGGGTRPSGQDIRATMQRKGVSSSVSFEEEEEDEDEDSSSSSQLNSSPRPSSATSRKSLREAASAPSPPAPEPSVDVEVQDLEEFALRPAPQGITIKCRITRDKKGMDRGMYPTYFLHLDREDGKKVFLLAGRKRKKSKTSNYLISVDPTDLSRGGDSYIGKLRSNLMGTKFTVYDNGVNPQKASSSTLESGTLRQELAAVCYETNVLGFKGPRKMSVVVPGMTMVHERVSIRPRNEHETLLARWQNKNTESIIELQNKTPVWNDDTQSYVLNFHGRVTQASVKNFQIIHGNDPDYIVMQFGRVAEDVFTMDYNYPLCALQAFAIALSSFDSKLACE*