Part of scaffold_1642 (Scaffold)

For more information consult the page for scaffold_1642 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

EIF3F ENSTTRG00000016586 (Bottlenosed dolphin)

Gene Details

eukaryotic translation initiation factor 3, subunit F

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015723, Bottlenosed dolphin)

Protein Percentage 98.87%
cDNA percentage 98.31%
Ka/Ks Ratio 0.10692 (Ka = 0.0053, Ks = 0.0496)

EIF3F ENSBTAG00000004861 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000046146, Cow)

Protein Percentage 97.52%
cDNA percentage 94.67%
Ka/Ks Ratio 0.07085 (Ka = 0.0131, Ks = 0.1848)

EIF3F  (Minke Whale)

Gene Details

eukaryotic translation initiation factor 3, subunit F

External Links

Gene match (Identifier: BACU004471, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.52%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0218)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1092 bp    Location:448231..440791   Strand:-
>bmy_18088
ATGGCCACGCCGGCAGTACCGCCGAGCGCGCCTCCCGCCACCCCAACCGAAACCCCGGCTGCGGCCTCAGACCCGGCCCCGGCTCCAGCCCCAGCCTCAGCCTCAGCGCCGGCTCCAGCGCCGGTTCCAGCTCCAACGCCGGCTCCAGCCTCATCCTCAGACCCGGCGGCAGCAGCGGCTACGACCGCGGCTCCGGGCCAGACCCCGGCCTCAGCGCCAGCCCCAGCGCAGACCCCGGCACAGTCGCTGCCTGGCCCGGCTCTCCCAGGCCCCTTCCCTGGCGGCCGCGTGGTCCGGCTGCACCCGGTCATTTTGGCCTCCATCGTGGACAGCTACGAGCGACGCAACGAGGGCGCTGCCCGAGTCATCGGGACCCTGCTGGGAACCGTTGACAAGCACTCAGTGGAAGTCACCAACTGCTTTTCAGTGCCGCACAATGAGTCAGAAGACGAGGTGGCTGTTGACATGGAATTTGCTAAGAACATGTATGAATTGCACAAGAAAGTCTCTCCAAATGAGCTCATCCTGGGCTGGTATGCTACAGGCCATGACATCACAGAGCACTCAGTGCTGATCCATGAGTACTACAGCCGGGAAGCCCCCAACCCCATTCACCTCACAGTGGACACGAGCCTCCAGAACGGCCGCATGAGCATTAAGGCCTACGTCAGCACTTTAATGGGTGTTCCTGGGAGGACCATGGGGGTGATGTTCACCCCTCTGACAGTGAAATACGCATATTATGACACTGAACGCATTGGAGTTGACCTGATCATGAAGACGTGTTTTAGCCCCAACCGGGTAATCGGCCTCTCCAGTGACTTGCAGCAAGTGGGAGGGGCATCGGCCCGCATCCAGGATGCCCTCAGCACAGTGTTGCAGTACGCGGAGGACGTGCTGTCTGGAAAGGTGTCAGCTGACAATACCGTGGGCCGCTTCTTGATGAGTCTGGTTAACCAAGTACCCAAAATAGTTCCTGAGGACTTCGAGACCATGCTCAACAGCAACATCAACGACCTGCTGATGGTGACCTACCTGGCCAATCTCACGCAGTCACAAATTGCCCTCAATGAGAAACTTGTGAACCTGTGA

Related Sequences

bmy_18088T0 Protein

Length: 364 aa      View alignments
>bmy_18088T0
MATPAVPPSAPPATPTETPAAASDPAPAPAPASASAPAPAPVPAPTPAPASSSDPAAAAATTAAPGQTPASAPAPAQTPAQSLPGPALPGPFPGGRVVRLHPVILASIVDSYERRNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKTCFSPNRVIGLSSDLQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPEDFETMLNSNINDLLMVTYLANLTQSQIALNEKLVNL*