Part of scaffold_1683 (Scaffold)

For more information consult the page for scaffold_1683 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SEC23A ENSTTRG00000017123 (Bottlenosed dolphin)

Gene Details

Sec23 homolog A (S. cerevisiae)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016231, Bottlenosed dolphin)

Protein Percentage 78.62%
cDNA percentage 81.6%
Ka/Ks Ratio 0.62649 (Ka = 0.1484, Ks = 0.2369)

BT.69980 ENSBTAG00000003708 (Cow)

Gene Details

Protein transport protein Sec23A

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000004831, Cow)

Protein Percentage 97.96%
cDNA percentage 94.57%
Ka/Ks Ratio 0.06063 (Ka = 0.0134, Ks = 0.2213)

SEC23A  (Minke Whale)

Gene Details

Sec23 homolog A (S. cerevisiae)

External Links

Gene match (Identifier: BACU007381, Minke Whale)

Protein Percentage 82.6%
cDNA percentage 86.1%
Ka/Ks Ratio 0.54159 (Ka = 0.1341, Ks = 0.2475)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1917 bp    Location:97932..34507   Strand:-
>bmy_18132
ATGACAACCTATTTGGAATTCATCCAACAAAATGAAGAACGAGATGGAGTCCGATTTAGTTGGAATGTTTGGCCATCAAGTCGACTGGAAGCTACAAGAATGGTCGTTCCAGTAGCAGCCTTATTTACACCACTGAAGGAGAGACCAGATTTGCCACCCATTCAATATGAACCTGTTCTGTGTAGTAGGACCACTTGCCGTGCAGTTTTGAATCCTTTATGTCAAGTGGATTATCGAGCAAAACTCTGGGCTTGCAACTTTTGTTATCAAAGAAATCAGTTTCCACCTACTTATGCTGGTATATCTGAACTGAATCAACCTGCTGAACTTTTACCTCAGTTTTCTAGCATTGAATATGTAGTTCTGATATACATTTCCATACGATTCTTGCAGCCAGTACAGAAAATAGACATGAATCTCACAGATCTTCTGGGAGAACTGCAGCGAGACCCGTGGCCTGTACCACAGGGAAGGAGACCTTTGCGTTCCTCTGGGGTGGCACTTTCCATAGCCGTAGGACTACTTGAGTGTACTTTTCCCAACACTGGTGCTCGTATTATGATGTTCATTGGTGGTCCAGCCACTCAGGGGCCTGGAATGGTGGTTGGAGATGAATTGAAGACACCCATAAGATCATGGCATGACATTGAAAAAGACAATGCCAAATATGTTAAAAAGGGAACTAAGCATTTTGAAGCATTGGCTAATCGCGCTGCTACGACTGGTCATGTTATTGATATCTATGCATGTGCATTAGATCAGACAGGTCTCCTGGAGATGAAATGCTGTCCTAACCTTACTGGAGGATACATGGTAATGGGTGACTCTTTCAACACTTCCTTATTCAAGCAAACTTTTCAAAGAGTTTTTACCAAAGATATGCATGGACAGTTTAAAATGGGCTTTGGTGGTACATTAGAAATAAAGGAGATAGGAACAGGTGGTACTTGCCAATGGAAGATATGTGGACTCAGTCCCACTACAACCTTAGCCGTATATTTTGAAGTTGTCAATCAGCATAATGCTCCAATTCCTCAAGGAGGACGTGGTGCAATCCAGTTTGTGACTCAGTATCAGCATTCAAGTGGGCAGAGACGTATCCGAGTGACCACCATTGCTAGGAACTGGGCAGATGCTCAAACTCAAATCCAAAACATTGCTGCATCTTTTGACCAGGAGGCAGCTGCCATTCTTATGGCTCGGCTGGCAATATATAGAGCAGAAACAGAAGAAGGTCCAGATGTGCTTAGATGGCTAGACAGACAGCTCATTCGACTGTGTCAGAAATTTGGAGAGTATCACAAAGATGATCCAAGTTCCTTCAGATTTTCAGAAACTTTCTCCCTTTATCCACAGTTTATGTTTCATTTAAGAAGATCTCCTTTCTTGCAAGTTTTTAACAATAGTCCTGACGAGAGTTCATATTATCGTCACCATTTTATGCGTCAAGATTTGACCCAGTCTCTAATCATGATTCAGCCTATTCTGTATGCATATTCTTTTAGTGGACCACCAGAGCCGGTTCTTCTTGATAGCAGCAGCATTCTTGCAGATCGTATTCTCCTCATGGACACATTTTTCCAGATTTTGATTTATCATGGTGAGACCATAGCTCAGTGGCGTAAGTCGGGATACCAGGACATGCCAGAATATGAAAATTTCCGCCACCTTCTGCAAGCCCCAGTGGATGATGCACAGGAGATCCTTCACTCCAGATTTCCAATGCCGAGATACATTGACACTGAACATGGGGGCAGTCAGGCGCGTTTCCTGCTTTCGAAAGTCAACCCTTCACAGACTCATAATAATATGTATGCCTGGGGACAGGAGTCTGGAGCACCTATTCTCACAGATGATGTTAGTTTACAAGTGTTTATGGATCACTTAAAGAAACTTGCTGTGTCAAGTGCTGCTTGA

Related Sequences

bmy_18132T0 Protein

Length: 639 aa      View alignments
>bmy_18132T0
MTTYLEFIQQNEERDGVRFSWNVWPSSRLEATRMVVPVAALFTPLKERPDLPPIQYEPVLCSRTTCRAVLNPLCQVDYRAKLWACNFCYQRNQFPPTYAGISELNQPAELLPQFSSIEYVVLIYISIRFLQPVQKIDMNLTDLLGELQRDPWPVPQGRRPLRSSGVALSIAVGLLECTFPNTGARIMMFIGGPATQGPGMVVGDELKTPIRSWHDIEKDNAKYVKKGTKHFEALANRAATTGHVIDIYACALDQTGLLEMKCCPNLTGGYMVMGDSFNTSLFKQTFQRVFTKDMHGQFKMGFGGTLEIKEIGTGGTCQWKICGLSPTTTLAVYFEVVNQHNAPIPQGGRGAIQFVTQYQHSSGQRRIRVTTIARNWADAQTQIQNIAASFDQEAAAILMARLAIYRAETEEGPDVLRWLDRQLIRLCQKFGEYHKDDPSSFRFSETFSLYPQFMFHLRRSPFLQVFNNSPDESSYYRHHFMRQDLTQSLIMIQPILYAYSFSGPPEPVLLDSSSILADRILLMDTFFQILIYHGETIAQWRKSGYQDMPEYENFRHLLQAPVDDAQEILHSRFPMPRYIDTEHGGSQARFLLSKVNPSQTHNNMYAWGQESGAPILTDDVSLQVFMDHLKKLAVSSAA*