Part of scaffold_1683 (SequenceType object (1))

For more information consult the page for scaffold_1683 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PNNENSTTRG00000017129 (Bottlenosed dolphin)

Gene Details

pinin, desmosome associated protein

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000016236, Bottlenosed dolphin)

Protein Percentage 87.23%
cDNA percentage 87.66%
Ka/Ks Ratio 0.22319 (Ka = 0.0134, Ks = 0.06)

BT.49763ENSBTAG00000026995 (Cow)

Gene Details

pinin

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000038454, Cow)

Protein Percentage 97.5%
cDNA percentage 96.99%
Ka/Ks Ratio 0.10472 (Ka = 0.0114, Ks = 0.1087)

PNN (Minke Whale)

Gene Details

pinin, desmosome associated protein

External Links

Gene match (Identifier: BACU007384, Minke Whale)

Protein Percentage 99.29%
cDNA percentage 99.39%
Ka/Ks Ratio 0.14659 (Ka = 0.0024, Ks = 0.0167)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence SequenceType object (2)

Length: 2199 bp    Location:148245..156115   Strand:+
>bmy_18135
ATGGCGGTCGCAGTGAGAACTTTGCAGGAGCAGCTAGAAAAGGCCAAAGAGAGCCTAAAGAATGTGGATGAGAATATTCGCAAGCTCACCGGGCGGGATCCGAATGACGTGAGGCCCATCCAAGCCAGATTGCTGGCCCTTTCTGGTCCTGGTGGAGGTAGAGGACGTGGTAGTTTATTGCTGAGGCGTGGATTCTCAGATAGTGGAGGAGGACCCCCAGCCAAACAGAGAGACCTTGAAGGGGCAGTCAGTAGGCTGGGCGGGGAGCGTCGGACTCGGAGAGAATCACGCCAAGAAAGCGACCCAGAGGACGATGATGTTAAGAAGCCAGCTTTGCAGTCTTCAGTTGTAGCTACCTCCAAAGAGCGCACACGGAGAGACCTTATCCAGGATCAAAATATGGATGAAAAGGGAAAGCAAAGGAACCGACGAATATTTGGCTTGTTGATGGGCACCCTTCAGAAATTTAAACAAGAATCCACTGTTGCTACCGAAAGGCAAAAGAGACGCCAGGAAATTGAACAGAAACTTGAAGTGCAGGCAGAAGAAGAAAGAAAGCAGGTTGAAAATGAGAGGAGAGAACTGTTTGAAGAGAGGCGTGCTAAACAGACAGAACTGCGGCTTTTGGAACAGAAGGTTGAGCTTGCGCAGCTGCAAGAAGAATGGAATGAGCATAATGCCAAGATAATTAAATATATAAGAACTAAAACAAAGCCCCATTTGTTCTATATTCCTGGAAGAATGTGTCCAGCTACCCAAAAACTAATAGAAGAGTCACAGAGAAAAATGAATGCTTTATTTGAAGGTAGACGCATCGAATTTGCAGAACAAATAAATAAAATGGAGGCTAGGCCTAGAAGACAATCAATGAAGGAAAAAGAGCATCAGGTGGTGCGTAATGAAGAACAGAAGTCGGAACAAGAAGAGGGTAAGGTTGCTCAGCGAGAGGAAGAGTTGGAGGAGACAGGTAATCAGCACAATGATGTAGAAATAGAGGAAGCAGGAGAGGAAGAGGAAAAGGAAATAGGTATAGTTCATAGTGATGCAGAGAAAGAACAGGAGGAGGAGGAACAAAAGCAGGAAATGGAAGTTAAGATGGAGGAAGAAACTGAGGTAAGGGAAAGTGAGAAGCAGCAGGATAGTCAGCCTGAAGAAGTTATGGATGTGCTGGAGATGGTCGAGAGTGTCAAAAATGTAATTGCTGAGCAGGAGGTAATGGAAATCAATCAAGTTGAAAGCATAGAACCTTCAGAAAATGAAACTAGCAAAGAATTGGAGCCAGAGTTGGAATTTGAAGTTGAGCCAGATAAAGAATGTAAATCTCTTTCTCCTGCAAAAGAGAATGCTAGTGCTCTAGAAATGGAAAATGAGCCTGAGGAAAAAGAAAAAGAATCTGAGCCCCAGCCTGAGCCTGTGGCTCAACCTCAGTCCCTGCCTCAGCCCCAGCCCCACTCCCACTCCCACTCCCACTCTCACTCCCACTCTCASTCCCACTCTCAGTCCCACTCCCAGTCCCAACCAGTACTCCAGCCCCAGCCTCTCTCTCAGCCTGAGACTTTGCCATTAGCTGTTTCACAGCCACCACCTCAGGTTATTCAGGAGCAAGGGCATTTACCACCTGAGAGGAAGGAGTTTCCTGTAGAATCTGTAAAACTCACTGAGGTGATAGTAGAACCAGTCTTGACAGTACATTCAGAGAGCAAGAGCAAAACCAAAACGAGGAGCAGAAGTAGAGGTCGAGCTAGAAATAAAACAAGCAAGAGTAGAAGTCGAAGCAGTAGCAGTAGTAGTTCTAGTAGCAGTTCAACCAGTAGCAGCAGTGGAAGCAGTTCCAGCAGTGGCAGTAGCAGTAGTCGAAGTAGTTCCAGTAGCAGCTCCAGCACAAGTGGCAGCAGCAGTAGAGACAGTAGCAGCAGCAGTACTAGTAGTAGTGAGAGTAGAAGTCGGAGTAGGGGCCGGGGACATAACAGAGATAGAAAGCACAGAAGGAGCGTGGATCGGAAACGAAGGGATGCTTCAGGACTAGAAAGAAGTCACAAATCTTCAAAAGGAGGTAGTAGTAGAGATACAAAAGGATCAAAGGATAAGAATTCCCGGTCTGACAGAAAGAGGTCTATATCAGAGAGTAGTCGATCAGGCAAAAGATCTTCAAGAAGTGAAAGAGACCGAAAATCAGACAGGAAAGACAAAAGGCGTTAA

Related Sequences

bmy_18135T0 SequenceType object (3)

Length: 733 aa      View alignments
>bmy_18135T0
MAVAVRTLQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALSGPGGGRGRGSLLLRRGFSDSGGGPPAKQRDLEGAVSRLGGERRTRRESRQESDPEDDDVKKPALQSSVVATSKERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQAEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPHLFYIPGRMCPATQKLIEESQRKMNALFEGRRIEFAEQINKMEARPRRQSMKEKEHQVVRNEEQKSEQEEGKVAQREEELEETGNQHNDVEIEEAGEEEEKEIGIVHSDAEKEQEEEEQKQEMEVKMEEETEVRESEKQQDSQPEEVMDVLEMVESVKNVIAEQEVMEINQVESIEPSENETSKELEPELEFEVEPDKECKSLSPAKENASALEMENEPEEKEKESEPQPEPVAQPQSLPQPQPHSHSHSHSHSHSXSHSQSHSQSQPVLQPQPLSQPETLPLAVSQPPPQVIQEQGHLPPERKEFPVESVKLTEVIVEPVLTVHSESKSKTKTRSRSRGRARNKTSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSRSSSSSSSSTSGSSSRDSSSSSTSSSESRSRSRGRGHNRDRKHRRSVDRKRRDASGLERSHKSSKGGSSRDTKGSKDKNSRSDRKRSISESSRSGKRSSRSERDRKSDRKDKRR*