Part of scaffold_1657 (Scaffold)

For more information consult the page for scaffold_1657 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PDCD2L ENSTTRG00000012915 (Bottlenosed dolphin)

Gene Details

programmed cell death 2-like

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012250, Bottlenosed dolphin)

Protein Percentage 91.1%
cDNA percentage 94.07%
Ka/Ks Ratio 0.67155 (Ka = 0.0546, Ks = 0.0812)

PDCD2L ENSBTAG00000002571 (Cow)

Gene Details

programmed cell death protein 2-like

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000003327, Cow)

Protein Percentage 86.38%
cDNA percentage 88.79%
Ka/Ks Ratio 0.39689 (Ka = 0.0888, Ks = 0.2237)

PDCD2L  (Minke Whale)

Gene Details

programmed cell death 2-like

External Links

Gene match (Identifier: BACU000576, Minke Whale)

Protein Percentage 94.49%
cDNA percentage 95.94%
Ka/Ks Ratio 0.85367 (Ka = 0.0387, Ks = 0.0454)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1038 bp    Location:130811..123237   Strand:-
>bmy_18148
ATGGCGGCCGTTCGGAAGCCGGTGCTGCTCGGGCTTCGAGATACCGCAGTGCACGGCTGCCCCACGGGGCTGGGCGCCTGGACCGCGAGCAAGCTGGGCGGCGTTCCGGACGCCCTGCCCGCCGTGGCAGCGCCGAGGCCAGTGTGTGAACTTTGCAGGCAGCCGCTTGCCCTGGTCGTGCAGGTGTACTGCCCGCTGGAAGGCTCCCCGTTTCATCGGCTCCTGCACGTGTTCGCTTGCCCCCGCCCGGGGTGCGCTAGCGGCAGGGCGCGCAGTTGGAAGGTGTTGCGCTCCCAGTGCCTGCAAATACGAGAGAAAGAGACGCAGGACGCTCAGAAACAGGAAAATGGCCTCACAGCTGAGGATTGGTGTGAAGGTGCAGATGACTGGGGAAGTGACAGTGACGAGGCGCCTCCACCACAGGTTATCTCAGATTTTGGAAATGATTCCAGCAGTGCCAAAGACAGAGACTGGACTGCCCAGCTCCAAGACCTCCGCCTGCAGGATACTGTCCCGGGTGCTGCTCCTGCTGTGCCTCCTGGGGAAGGGGTGGCCTTGCCTTCTGTGGTGCCGCAGTTCCTGCCCTACTACATCTGTGTGGTTGATGAGGATGACTACAGGGACTTTGTCAGTCTAGATCATGCTCAGAGCCTTCTGAGGGAGTATCAGCAGAGAGAGGGAACTGATATGGAACAGTTGCTTTCCCACAGTCTTTCTAGTGATGGTGATGAAAAATATGAGAAGACCATAATTAAAAGTGGAGATAAGATGTTTTACAAATTCATGAAGAGAATTGCTGCTTGTCAGGAGCAGATTTTGAGGTATTCCTGGAGTGGAGAACCACTTTTCTTGACCTGCCCTACATCAGAAGTCACTGAGCTCCCAGCCTGCAGTCACTGTGGAATCCGAAGGATATTTGAGTTTCAGCTTATGCCAGCGCTGGTCAGCATGCTCAGAAGTGCTAATTTAGGTAATAAGCCGTTTATTTATTTGAGTTTGTGGGTTTCTAGCACTAATTTGGAATTATTTTWAAAATGA

Related Sequences

bmy_18148T0 Protein

Length: 346 aa      View alignments
>bmy_18148T0
MAAVRKPVLLGLRDTAVHGCPTGLGAWTASKLGGVPDALPAVAAPRPVCELCRQPLALVVQVYCPLEGSPFHRLLHVFACPRPGCASGRARSWKVLRSQCLQIREKETQDAQKQENGLTAEDWCEGADDWGSDSDEAPPPQVISDFGNDSSSAKDRDWTAQLQDLRLQDTVPGAAPAVPPGEGVALPSVVPQFLPYYICVVDEDDYRDFVSLDHAQSLLREYQQREGTDMEQLLSHSLSSDGDEKYEKTIIKSGDKMFYKFMKRIAACQEQILRYSWSGEPLFLTCPTSEVTELPACSHCGIRRIFEFQLMPALVSMLRSANLGNKPFIYLSLWVSSTNLELFXK*